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SCNpilot_expt_1000_bf_scaffold_4456_curated_15

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 9660..11522

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AWI9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 622.0
  • Bit_score: 610
  • Evalue 2.20e-171
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJJ27845.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.3
  • Coverage: 622.0
  • Bit_score: 610
  • Evalue 3.00e-171
signal-transducer protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 617.0
  • Bit_score: 597
  • Evalue 4.60e-168

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
ATGATGCTCTCGCCTGAACTCCAGTTCAGCCAGCAATGGCGCCTCGCCGCCGAGGGCGGCACGATCGATTCCGAGCGTCTGATGGATCTTGTCGTCGGAGCTTACCGCGACTACCAGACGGAAATCCGCCTCGCCGAAGAGGCGATGGGCAAGATGCGCTCCGTCCACCAGGCGACGACGGCAGACCTCGATTTCCGTCTTGCCGCCGCCAAGGCACGCAATGCGCTTTTGCAGAACGTCCTCGACAATGCGCCTGTCGGCATCAGCCTGTTCGACAGGAACGGCACGCTCGTCGCCTGCAACAAGCAATTCTGCCAGCATCTCGGTCTTCCGTCCGCCAGCGTCCAGCCGGGGGTGAACTTCGAGACGCTGCGCCCGCTGGTCAAGGGAAAGGAGAGCATGCGCAGTGCACTTCTGCCGCAGGCATCCGAGACCACGCAGCCGCAACGCACCGAATTTCGCGAATGGGAAATGGATGACGGAAGGATCATCCATGTCGTCCTGACCTTCCTGCCGGACGGCCAGTGTGTCGCCATCCACCAGGACGCGACAAAGGAGCGCAAGGCCGGGGACCGGCTACGGGAGATCGCGCTGCGCGATCCGCTGACCAACCTCGCCAACCGTCTCGCCTTCCGCCAACAACTGGAGGAGCGGCTTGCCGGGCTGAAGGACGGTGAAAAGCTCGCCTTGCTGCAACTCAATCTCGATTTCTTCAAGACGATCAACGATACGATGGGCGCCTCGACCGGCGACGAGGTGCTGAAGCTCGCCGCCGAGCGGCTGGTCGAGTGCCTGGGACCGCAGGATGTCGTCGCACGGCTCGGATCCGACGAATTCGTGATCATCCAGACGAAGGCCCGCCAGCCCGAGGGATCGACCGATCTCGCCCACGCGATCATCGACCAGCTCGGTCACCCGTTTTCGGTCGATGGCAAGCAGATCCTGCTCAGCACCTCGATCGGCATCGTCATCGCGCCCGACTACGGCCAGCAGCTCGATATTCTTCTGCGCAGCGCCGGCATGGCGCTGGCCCGCGCCAAATCCGAAGGCCGCAAGACCTTGCGGTATTTCAGGCCGGAGATGGATGCCCGCCAGCAGGCGCGCCGCGAACTGGAGGCCGACCTGCGGAAAGCGGTGCAGAACGGCGAATTCGAGCTGTATTACCAGCCGATCTACGATCTTCACCGGGAAAAGGTCTCGACGCTCGAAGCGCTGCTGCGCTGGAACCACCCGCAGCGCGGCCGTGTGTCGCCGGTCGATTTCATTCCCCTGGCGGAGGAAATGGGCCTGATCGTCGATCTCGGCCGCTGGGTGCTGTACCAGGCCTGCCTCGATGCGGCGCAATGGCCGGAGGAGGTAAAAGTCTCCGTCAATGTTTCCGCCATCCAGTTCAAGAGCGCCGATCTCTTCGGCGACATCGTCTCGGCGCTGGCTGTGGCCGGGCTTCCGCCGGAACGGCTGGACCTGGAAATCACCGAAAGCGTCATCATCCAGAACCGCGACCAGACGCTCGCTTTGCTGCACGACCTGAAATTCCATGGCGTCAGCATCTCGATGGATGATTTCGGAACCGGCTATTCCTCGCTGAGCTACCTGCGCAGCTTCCCGTTCGACAAGATCAAGATCGACAAGTCCTTCGTCGACGATATCGCAGAAAACCAGCAGGCGCTGGCGCTGATCCGGGCGATCATCTTCCTCGGCAAGACACTCGGCATGGCGATCACGGTCGAGGGCGTGGAAACCAGCGAACAGTTCTCGCTGCTGCAGAAGGAAGCCTGTGACGAAATCCAGGGGTATTACGTCAATGCGCCGCGGCCGGTCAGCGAGGCCCAGGCGATGATGGAATTCTACCCCGCCGAATAG
PROTEIN sequence
Length: 621
MMLSPELQFSQQWRLAAEGGTIDSERLMDLVVGAYRDYQTEIRLAEEAMGKMRSVHQATTADLDFRLAAAKARNALLQNVLDNAPVGISLFDRNGTLVACNKQFCQHLGLPSASVQPGVNFETLRPLVKGKESMRSALLPQASETTQPQRTEFREWEMDDGRIIHVVLTFLPDGQCVAIHQDATKERKAGDRLREIALRDPLTNLANRLAFRQQLEERLAGLKDGEKLALLQLNLDFFKTINDTMGASTGDEVLKLAAERLVECLGPQDVVARLGSDEFVIIQTKARQPEGSTDLAHAIIDQLGHPFSVDGKQILLSTSIGIVIAPDYGQQLDILLRSAGMALARAKSEGRKTLRYFRPEMDARQQARRELEADLRKAVQNGEFELYYQPIYDLHREKVSTLEALLRWNHPQRGRVSPVDFIPLAEEMGLIVDLGRWVLYQACLDAAQWPEEVKVSVNVSAIQFKSADLFGDIVSALAVAGLPPERLDLEITESVIIQNRDQTLALLHDLKFHGVSISMDDFGTGYSSLSYLRSFPFDKIKIDKSFVDDIAENQQALALIRAIIFLGKTLGMAITVEGVETSEQFSLLQKEACDEIQGYYVNAPRPVSEAQAMMEFYPAE*