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SCNpilot_expt_1000_bf_scaffold_2444_curated_9

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(10546..10887)

Top 3 Functional Annotations

Value Algorithm Source
soxD; sarcosine oxidase subunit delta (EC:1.5.3.1) similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 113.0
  • Bit_score: 210
  • Evalue 2.20e-52
Sarcosine oxidase, delta subunit {ECO:0000313|EMBL:AFL53845.1}; EC=1.5.3.1 {ECO:0000313|EMBL:AFL53845.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 113.0
  • Bit_score: 210
  • Evalue 9.90e-52
Sarcosine oxidase, delta subunit n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XD89_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 113.0
  • Bit_score: 210
  • Evalue 7.00e-52

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGCTTCTCATCTATTGCCCCTATTGCGAAGAAGAGCGCTCCGAGCTCGAATTCCGCGGCGCCGGCGACGCCCATATCGCCCGGTCGACCAATATCGCCGCGATCTCCGACGAGGAGTTCGAGGCCTATTTCTTCCTGCGCGAGAACCCCAAGGGGATGATCTTCGAGCGCTGGCGCCACATCCATGGCTGCGGCCGCTTCTTCAATGCGGCGCGTGACACGGTCAGCGACCGTTTCGTCAAGACCTACAAGGCCGGCGAGCCGAAGCCGGATCTGCATCCGGCACCGGCGACCGCCGCCACCGTCGAAACCTACGAGGCCCTGGAAGGAGACGCCCAATGA
PROTEIN sequence
Length: 114
MLLIYCPYCEEERSELEFRGAGDAHIARSTNIAAISDEEFEAYFFLRENPKGMIFERWRHIHGCGRFFNAARDTVSDRFVKTYKAGEPKPDLHPAPATAATVETYEALEGDAQ*