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SCNpilot_expt_1000_bf_scaffold_2444_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 19207..20775

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000360D236 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 522.0
  • Bit_score: 849
  • Evalue 2.30e-243
Putative TRAP transporter large permease protein HI0050 {ECO:0000313|EMBL:CDM59263.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 522.0
  • Bit_score: 846
  • Evalue 2.80e-242
TRAP family transmembrane transporter protein similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 500.0
  • Bit_score: 830
  • Evalue 3.50e-238

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
TTGTTTACCTACGGAATTATGCCGCCCCTGATGTTCGTGGGCATGATCCTCTTCATGCTTTACGGCTTCCCGGTGGCTTTCTCGCTGGCTGCCGTCGGCCTGTTTTTCGGCGTCATCGGCATCCTGACCGGGCATTTCGACCCGGTCTTCCTGCAGGCGCTGCCGCATCGCTTCTTCGGTATCGTCTCCAACGACCTGCTGCTGGCCATCCCCTTCTTCACCTTCATGGGGGCGATCCTCGAACGCTGCGGCCTGGCCGAGGACCTGCTCGAAGGAACCGGCAAGCTGTTCGGCGCCATCCCCGGCGGCCTTGCCTATGCCGTCATCGTCGTCGGCGCCATCCTCGGCGCCATCACCGGCACGGTGGCCGCCTCGGTCATCACCATGGGCGTGATCTCGCTGCCGATCATGCTGCGCTACGGCTACAACCAGCGGCTGGCGACCGGCGTCATCGCCGCCTCGGGAACGATCCCCCAGCTCATCCCGCCATCGCTGGTGCTCGTCGTCCTGGCCGACCAGCTCGGCCGTTCGGTCGGCGACATGTATCTCGGCGCCATCGGCCCGTCGCTGCTGCAGGTGGCGATCTTTCTCGTTTTCATCCTGATCCTGTCGATCGTCCGGCCGAAGGACATGCCGCCGCTGCCGCTGGAAGTGCGCGGCCAGCTGGACATGAAGCTGCTGTTCAAGGTGCTGGCCGGCATGATCCCCTCGATCGTGCTGATCTTCCTGGTGCTCGGCACGATCTTCATGGGGCTTGCCACGCCGACGGAAGCCGGCGCGCTCGGCGTCGTCGGCGCCATGGCGCTCGCCGCCATGCACCGCCGCCTGACCTGGCCGCTGATCCGCCAGGGCATGAGCTCGACGATGCACATCACCTCGATGGTGGTGTTCATCCTCATCGGCTCCACCTGCTTCAGCCTGGTCTTCCAGGGCATGGATGGTTCCTTGTGGATCGAACACTTGCTGACCGGCCTGCCGGGCGGCCCGATCGGCTTCCTGATCTTCGTCAACATCTTCATCTTCGTCCTCGCCTTCTTCCTGGATTTCTTCGAGATCGCCTTCATCGTCATCCCGATGCTGGCACCGGTGGCGCAGGCGCTCGGCATCGATCTCATCTGGTTCGGCGTGCTGATCTGCATCAACATGCAGACCAGCTTCATGCACCCGCCATTCGGCTTCGCGCTCTTCTACCTGCGCTCCATCGCGCCGCGGGAGGTGAAGACGACGGACATCTACATGGGCGCCCTGCCCTGGCTGGTGATGCAGCTGATCCTGGTGGCCGTGGTGATCTTCTGGCCGCAATCGGTGACGCATTGGCTGGACAAGGGGCCGCAGGTCGATCCGAACTCGATCAACATCATCGTGCCCGGCTTCGGCGAGAATACCGGCGACCAGATGCCGAATTTCGGCCTGCCGCCGATCGGCTCCGACGACAAGGGCAACACGCAGCTGCCGGGCCTCAGCCTGCCGGCGCTGGACGGCCTGCCCGGCGAACAACCGGCCGGCGGCGAACAGAAGCCGGAACAGAAGCCGAAGGTCGATCTCAGCCAGCCGCCGGTCATCCAGTAA
PROTEIN sequence
Length: 523
LFTYGIMPPLMFVGMILFMLYGFPVAFSLAAVGLFFGVIGILTGHFDPVFLQALPHRFFGIVSNDLLLAIPFFTFMGAILERCGLAEDLLEGTGKLFGAIPGGLAYAVIVVGAILGAITGTVAASVITMGVISLPIMLRYGYNQRLATGVIAASGTIPQLIPPSLVLVVLADQLGRSVGDMYLGAIGPSLLQVAIFLVFILILSIVRPKDMPPLPLEVRGQLDMKLLFKVLAGMIPSIVLIFLVLGTIFMGLATPTEAGALGVVGAMALAAMHRRLTWPLIRQGMSSTMHITSMVVFILIGSTCFSLVFQGMDGSLWIEHLLTGLPGGPIGFLIFVNIFIFVLAFFLDFFEIAFIVIPMLAPVAQALGIDLIWFGVLICINMQTSFMHPPFGFALFYLRSIAPREVKTTDIYMGALPWLVMQLILVAVVIFWPQSVTHWLDKGPQVDPNSINIIVPGFGENTGDQMPNFGLPPIGSDDKGNTQLPGLSLPALDGLPGEQPAGGEQKPEQKPKVDLSQPPVIQ*