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SCNpilot_expt_1000_bf_scaffold_7329_curated_2

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 401..1084

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Sinorhizobium medicae RepID=UPI0003771A61 similarity UNIREF
DB: UNIREF100
  • Identity: 85.1
  • Coverage: 228.0
  • Bit_score: 385
  • Evalue 3.20e-104
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 228.0
  • Bit_score: 384
  • Evalue 2.20e-104
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABR64038.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 228.0
  • Bit_score: 384
  • Evalue 1.00e-103

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GTGATAATTGCAGCGGAGCGGGAAGGCAGGACGCCAGGCATTCGCCCGACGAGCGTCGTCGAGGGCGTCTATGACAGCATCTACCATCGGCTGATGTCGCTGGACATCGCCCCCGGCGCGCGCATCCCCATCGACGTTCTGGCGCGGGATCTCGGTGTGTCGCAGACGCCGATCCGCGAGGCGCTCAGCCGGCTCGAGCGAGAAGGCCTCGTGCGCAAGGAACATCTCGTCGGCTACAGCGCCGCTCCCCAGTGGACGCGCAAGCAGTTCGAGGACCTCTATGCGTTCCGTCTGCTCGTAGAACCCGAGGCGACCCGGCTTGCCGTCGTCAACATGACGCCCGAAGCGCTGTCAGAACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCGGTCGATCGCAACACCCGCTATTCGCGATTTGCCCGCGCCGACGCACAGTTCCATGATGCCATTCTCAAGATCGCCGGAAACGAAGTGATCCGCAGTACGCTTTCGAGCCAGCATGTCCATCTGCATATCTTCCGGCTGATGTTTCACACACGAGTGACGCAGGAAGCGCTCGAAGAGCATGAGAACCTGCTCACGGCGTTCCGCTCCGGCGATCCGCAGGCGGCGTATGATGCCATGCGCATCCACATCGAGCGTTCGCGTGATCGTCTGCTGTCGGCTTTCGAATGA
PROTEIN sequence
Length: 228
VIIAAEREGRTPGIRPTSVVEGVYDSIYHRLMSLDIAPGARIPIDVLARDLGVSQTPIREALSRLEREGLVRKEHLVGYSAAPQWTRKQFEDLYAFRLLVEPEATRLAVVNMTPEALSELXXXXXXXXXXXPVDRNTRYSRFARADAQFHDAILKIAGNEVIRSTLSSQHVHLHIFRLMFHTRVTQEALEEHENLLTAFRSGDPQAAYDAMRIHIERSRDRLLSAFE*