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SCNpilot_expt_1000_bf_scaffold_1486_curated_15

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(15300..15878)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4B8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 192.0
  • Bit_score: 321
  • Evalue 8.20e-85
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:EHS52424.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 192.0
  • Bit_score: 321
  • Evalue 1.10e-84
tadC; component of pilus protein; K12511 tight adherence protein C similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 192.0
  • Bit_score: 317
  • Evalue 2.80e-84

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGTTCGTGCTCGGCAATCTCGGCGACAAGCCGTTGCCGTTGCGTATCCTGTTGACGGTGGTGATCGGTTATGTCGGTTTCTATGCGCCGAACATCTACGTCTCGAACCGGATGTCGAAACGGCAGCATTCCATCAGGCGCGCCTGGCCCGACGGCCTCGACCTGATGCTGATCTGCGTCGAGGCCGGCAACTCCATGGAAGCGGCGATGCGGCGCGTTTCGGAAGAAATGGCCGAACAATCGCCGGCGCTCGCCGAAGAAATGGTGCTGACGACAGCCGAACTCTCCTTTCTCACCGACCGTCGCGTCGCGCTCGAAAATCTCGGCAACCGCACGCAGCTCGATGCGGTCAGGAACGTCACCCAGGCGCTGATCCAGGCCGACCGCTACGGCACCCCTGTTGCCCAGGCGCTGCGCGTGCTGGCGCAGGAAAGCCGCGACGAACGCATGAACGAGGCCGAGAAGAAGGCCGCCGCCCTGCCGCCGAAACTGACGGTGCCGATGATCCTGTTCTTCCTGCCGGTGCTGGTCGCCGTCATCCTCGGCCCGGCCGGCATCCAGGTGGCCGACAAGTTCTGA
PROTEIN sequence
Length: 193
VFVLGNLGDKPLPLRILLTVVIGYVGFYAPNIYVSNRMSKRQHSIRRAWPDGLDLMLICVEAGNSMEAAMRRVSEEMAEQSPALAEEMVLTTAELSFLTDRRVALENLGNRTQLDAVRNVTQALIQADRYGTPVAQALRVLAQESRDERMNEAEKKAAALPPKLTVPMILFFLPVLVAVILGPAGIQVADKF*