name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1486_curated_1
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..769
|
Putative integrase KpLE2 phage-like element n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q1V7_9RHIZ
Integrase {ECO:0000313|EMBL:AKI02646.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
phage integrase family site specific recombinase
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1637..1954
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J6U7_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJK78455.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1978..2643
|
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
msrA; Peptide methionine sulfoxide reductase msrA (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase) (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U3R5_RHIRD
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_4
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2867..3859
|
Basic membrane lipoprotein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VX39_9RHIZ
Basic membrane lipoprotein {ECO:0000313|EMBL:EJZ21985.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
outer membrane lipoprotein; K07335 basic membrane protein A and related proteins
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4086..5594
|
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C5B7D
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:EJC68914.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5602..6708
|
Sugar ABC transporter permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PI74_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:EKF60578.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
sugar/ribonucleotide ABC transporter transmembrane protein; K02057 simple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_7
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6719..7690
|
Putative ABC-type transport system, permease component n=1 Tax=Rhizobium sp. CF122 RepID=J2ITM4_9RHIZ
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:EJL52073.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7694..8086
|
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
cytidine deaminase n=1 Tax=Rhizobium RepID=UPI00037C6838
Cytidine deaminase {ECO:0000313|EMBL:GAJ94367.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_9
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8083..8868
|
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
Purine nucleoside phosphorylase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I575_9RHIZ
purine nucleotide phosphorylase
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8971..9741
|
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6US94_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9745..11061
|
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Thymidine phosphorylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LG62_RHITR
deoA; thymidine phosphorylase
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_12
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11206..11730)
|
Clan AA aspartic protease, TIGR02281 family n=1 Tax=Rhizobium sp. CF122 RepID=J2I7Z9_9RHIZ
Clan AA aspartic protease, TIGR02281 family {ECO:0000313|EMBL:EJL52065.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
peptidase aspartic family protein
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11868..12497)
|
upp; uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01218}; EC=2.4.2.9 {ECO:0000255|HAMAP-Rule:MF_01218};; UMP pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000255|HAMAP-Rule:MF_01218}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Uracil phosphoribosyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=UPP_RHILW
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_14
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12672..15068)
|
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Probable phosphoketolase n=1 Tax=Rhizobium sp. CF080 RepID=J3CK31_9RHIZ
phosphoketolase protein
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_15
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15300..15878)
|
Type II secretion system F domain-containing protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4B8_9RHIZ
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:EHS52424.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
tadC; component of pilus protein; K12511 tight adherence protein C
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_16
unknown
|
Not on your lists |
15985..16203
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_17
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16303..17307)
|
Flp pilus assembly protein TadB n=1 Tax=Rhizobium sp. CF080 RepID=J3CSS6_9RHIZ
Type II secretion system F domain-containing protein {ECO:0000313|EMBL:EUC00622.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Flp pilus assembly protein TadB
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_18
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17320..18816)
|
CpaF protein secretory protein kinase n=1 Tax=Rhizobium gallicum RepID=UPI0003638162
Type II secretion system protein E {ECO:0000313|EMBL:EJZ21964.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18847..20136)
|
Pilus assembly, two-component response regulator protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2A1X0_RHIET
Flp pilus assembly ATP-binding protein CpaE {ECO:0000313|EMBL:AIC25400.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
cpaE; pilus assembly protein, response regulator protein; K02282 pilus assembly protein CpaE
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_20
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20169..20888)
|
Pilus (Caulobacter type) biogenesis lipoprotein CpaD n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4B4_9RHIZ
Pilus (Caulobacter type) biogenesis lipoprotein CpaD {ECO:0000313|EMBL:EHS52420.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
ctpE; type IV pilus protein; K02281 pilus assembly protein CpaD
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_21
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20902..22476)
|
Type II and III secretion system protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F498_9RHIZ
Type II and III secretion system protein {ECO:0000313|EMBL:EHS52419.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
Flp pilus assembly protein, secretin CpaC
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_22
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22473..23282)
|
Flp pilus assembly protein CpaB n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F497_9RHIZ
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EHS52418.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
cpaB; pilus assembly protein; K02279 pilus assembly protein CpaB
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23471..23983)
|
putative type IV prepilin peptidase CpaA; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000366B620
Peptidase {ECO:0000313|EMBL:KDP70862.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
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SCNpilot_expt_1000_bf_scaffold_1486_curated_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24107..24280)
|
Flp/Fap pilin component n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZXI8_RHILW
Flp/Fap pilin component; K02651 pilus assembly protein Flp/PilA
Flp/Fap pilin component {ECO:0000313|EMBL:ACI57447.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24674..25072
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WA31_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC82073.1}; Flags: Precursor;; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
pilus subunit transmembrane protein
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_26
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25181..25813
|
Flp pilus assembly TadG-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RQQ0_RHIET
Flp pilus assembly TadG-like protein
Hypothetical conserved protein {ECO:0000313|EMBL:ABC89024.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25904..26344
|
membrane protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000362C14A
TadE-like protein {ECO:0000313|EMBL:EJB04686.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_28
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27212..27676
|
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Phosphopentomutase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6USB4_9RHIZ
deoB; phosphopentomutase
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_29
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27673..28641
|
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
Adenosine deaminase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHW5_RHITR
add; adenosine deaminase
|
|
SCNpilot_expt_1000_bf_scaffold_1486_curated_30
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28668..29027)
|
lactoylglutathione lyase (EC:4.4.1.5)
Glyoxalase/bleomycin resistance protein/dioxygenase n=2 Tax=Brucella RepID=D1D0S7_9RHIZ
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EEZ34120.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
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