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SCNpilot_expt_1000_bf_scaffold_1486_curated_22

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(22473..23282)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F497_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 269.0
  • Bit_score: 397
  • Evalue 9.60e-108
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EHS52418.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 269.0
  • Bit_score: 397
  • Evalue 1.40e-107
cpaB; pilus assembly protein; K02279 pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 262.0
  • Bit_score: 387
  • Evalue 4.10e-105

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 810
ATGAAACCCGCTCGCATAATCATCCTTGCTGTCGCCATTTCGGCGGCGGGCTTGGCCGGGATCCTGGCCATGAAACTGGCCGGCGGACAGACGAAAGTGGTCGAGCAGGCCCAGGCGATCATCAAGAAGGAGCCGACCGTCAACGTGCTGGTTTCGGCGATGAACCTGCCGGTCGGCTCGCGCCTGAACGCGGATTCCATCCGCTGGATGGCCTGGCCGGAAGGCAGCGTCGTCGAGGGCGTGATCACCGAGCAAAACCGGCCGAACGCCCTGACCGAGCTTGGAGGCGCCGTGGTGCGCCTGCCGATGTTCGAGGGTGAACCGGTCCGGGCGGAAAAGATCGCCGACGCCAACAGCCGAATCATGTCGTCGCTCCTGCCCTCCGGCAAGCGCGCGGTGGCGACCGATATCTCGGTATCGACCGGTGCTGGCGGTTTCATCCTGCCCAACGACCGGGTGGACGTCATCATGGTGCGCAAGGGCGAAGACACCAAGTACCTGACCGAGACGGTTCTTTCCAACGTCCGCGTGCTGGCGATCGACCAGCAGATCGAGGAGAAGAACGACGGCTCGAAAACGGTGGTCGGCACCACCGCGACGCTGGAACTGACGCCCGACCAGGCCAAGGTGATTTCCGTCGCCCAGCAGATGGCCGACCGGCTGTCGCTCGCCCTGCGCTCCGTCGCCGACGCCCAGGAAGAGGACACCGATGCGGCCGACTACCTTCTGAGCGGCGATACCGGCACGCCGTCGATCCAGGTGATCAAGTCCGGCTCGATCGTCAAAGCCAGCGAGACGAGAGCACAATGA
PROTEIN sequence
Length: 270
MKPARIIILAVAISAAGLAGILAMKLAGGQTKVVEQAQAIIKKEPTVNVLVSAMNLPVGSRLNADSIRWMAWPEGSVVEGVITEQNRPNALTELGGAVVRLPMFEGEPVRAEKIADANSRIMSSLLPSGKRAVATDISVSTGAGGFILPNDRVDVIMVRKGEDTKYLTETVLSNVRVLAIDQQIEEKNDGSKTVVGTTATLELTPDQAKVISVAQQMADRLSLALRSVADAQEEDTDAADYLLSGDTGTPSIQVIKSGSIVKASETRAQ*