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SCNpilot_expt_1000_bf_scaffold_2009_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(1..387)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 120.0
  • Bit_score: 103
  • Evalue 1.40e-19
FHA domain-containing protein {ECO:0000313|EMBL:EYR83989.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 120.0
  • Bit_score: 103
  • Evalue 1.90e-19
putative type VI secretion protein, FHA domain-containing; K11894 type VI secretion system protein ImpI similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 122.0
  • Bit_score: 80
  • Evalue 3.90e-13

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGATTCCCGATCCCGATCGTGTGCTCTCCAAGGCGCATTGCCGCATCGATCGAACGGAGAGAGGCTTTATGGTGACGGACACGTCAACAAATGGCGTGCGCATTAACGACGTACCCGTGGGGCGCGGTATTCCGGGGCTGCTGTCGCACGGGGATACGTTGCTCCTGGGCGACGCGATCATCGGCGTCGAGATAGAAACGATGCCGGCGGCAGTGGCGGACATGGCGAACGCGAATATATTGGGCGCGACGATACCCGGCGCGGCGGCCATCGAGGCGGTGCCGGGCAAGGTGTTCATGGACGGCCCCTTCGGCTTCGACGACAAGGCGCCAGAGCCGTCCGCTGCAATTTTACCGGCTTCGGAGGAGCCAGCGATACAACCGGGC
PROTEIN sequence
Length: 129
MIPDPDRVLSKAHCRIDRTERGFMVTDTSTNGVRINDVPVGRGIPGLLSHGDTLLLGDAIIGVEIETMPAAVADMANANILGATIPGAAAIEAVPGKVFMDGPFGFDDKAPEPSAAILPASEEPAIQPG