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SCNpilot_expt_1000_bf_scaffold_2009_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4734..6386

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036C21AD similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 549.0
  • Bit_score: 792
  • Evalue 2.10e-226
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EYR83984.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 539.0
  • Bit_score: 852
  • Evalue 3.10e-244
clpB3; ATP-dependent chaperone; type VI secretion associated protein; K11907 type VI secretion system protein VasG similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 534.0
  • Bit_score: 666
  • Evalue 9.30e-189

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
GTGGTCAAGGTCGACGAGCCGGGCGATGAGGCAGCCATCGGCATGATGCGCGGCCTGATCCCGACGCTTGAGCAGCATCACGGCGTGCGCGTGCTTGCCGAAGCGGTGGAGGATGCCGTCCGCCTGTCGCGGCGCTACATTCCGAGCCGCCAGCTTCCGGACAAGGCGGTCAGCCTGCTGGATACGGCCTGCGGCCGCGTCGCCGTCGCCGCGCATGGAACGCCGGCCGTGGTCGAAGACCGTCGCCGCCGGATCGAGATGATCGATACGGACCTCGCCGTCCTCGGACGCGAAGTGAAGATCGGCGCGGATCATGCAGAGCGCATCGCCGAGTTGAAGGCCGACCGTGAGAAGACGGCCTCCGAACTGGCCGAGATGGAAGCGCAGTGGGAAAAGGAACGTGACCTGGTGTCGCGGATCCGGGCGCTGCAGGAAGCGCTGGGCGAACTGGAAGAGGGGGCCGAACAGCCCGCCGACGCCAAGTCCCCGGACGAGATGCGCGAAGAACTGGCGGCGCTGGGTGCCGAACTGACCGAACTGCAGGGCGAAAACCCGCTGATGCGCGTCACGGTGGACAGCCAGGCGATTGCCGAAGTCGTCGGCAACTGGACCGGTATTCCGGTCGGCCGCATGGTGTCCAACGAAATCAAGACGGTTCTGGCTCTCAAGGACAAGCTCAGCGAGCGCGTCATCGGCCAGTCGCATGCGCTGGAAGCGATCGCTGAAACGATCCGCACCTCGCGCGCCAAACTGACGGATCCGCGCAAGCCGATCGGCGTTTTCCTCATGGTCGGCACCTCGGGCGTCGGCAAGACGGAAACGGCGCTGGCGCTGGCCGACCTCCTGTATGGCGGCGAGCAGAACCTCACCGTCATCAACATGTCGGAATTCAAGGAAGAGCATAAGGTGTCGATGCTCGTCGGTTCGCCCCCCGGCTATGTCGGTTACGGCGAAGGCGGCGTTCTGACCGAGGCGGTTCGCCGCCGGCCCTATTCCGTGGTGCTCTTCGACGAGATGGAAAAGGCCCATCCCGGCGTGCAGGACGTGTTCTACCAGGTCTTCGACAAGGGCATGCTGCGCGACGGTGAAGGCCGCGACATCGACTTCAAGAATACCATCATCATCATGACGTCGAATGCCGGCACGGATCTCATCCACAGGCTCTACGCTGATCCGGACAACCGACCCGACGTCGATACGCTGACCGAGGCGGTGCGTCCGGAACTGCTGAAGAGCTTCAAGCCGGCGTTCCTGGGGCGTTGCTCCGTCGTTCCTTATTTCCCGCTGGCGGACGATATCATCCGCAAGATCGTGGAACTGCAATTGAACCGCATCCGCAAGCGGTTCCTGGAAAATTACCGCGCAAACCTGACATGGGATGCGTCGCTGATCGCCGATATCGCCAGCCGTTGCACCGAAGTGGAAAGCGGCGCGCGCAATATCGAATATATCCTGTCCCGCGGATTGCTGCCGCGCCTGTCCGCCCATGTCCTGTCGATCATGGCGGACGGCAGGCAGGTCGGAAGCCTCAAGGCAGTCCTTGGATCGGATGGTCAGTTCGAGTTTGTGGAACAGGTGTCGGCCGACGACGTCGCCTCGCCTGCCGATATCGACGAGACAGCGGAAGAAGAGCCGGTCGCTGCCGCCGAATAA
PROTEIN sequence
Length: 551
VVKVDEPGDEAAIGMMRGLIPTLEQHHGVRVLAEAVEDAVRLSRRYIPSRQLPDKAVSLLDTACGRVAVAAHGTPAVVEDRRRRIEMIDTDLAVLGREVKIGADHAERIAELKADREKTASELAEMEAQWEKERDLVSRIRALQEALGELEEGAEQPADAKSPDEMREELAALGAELTELQGENPLMRVTVDSQAIAEVVGNWTGIPVGRMVSNEIKTVLALKDKLSERVIGQSHALEAIAETIRTSRAKLTDPRKPIGVFLMVGTSGVGKTETALALADLLYGGEQNLTVINMSEFKEEHKVSMLVGSPPGYVGYGEGGVLTEAVRRRPYSVVLFDEMEKAHPGVQDVFYQVFDKGMLRDGEGRDIDFKNTIIIMTSNAGTDLIHRLYADPDNRPDVDTLTEAVRPELLKSFKPAFLGRCSVVPYFPLADDIIRKIVELQLNRIRKRFLENYRANLTWDASLIADIASRCTEVESGARNIEYILSRGLLPRLSAHVLSIMADGRQVGSLKAVLGSDGQFEFVEQVSADDVASPADIDETAEEEPVAAAE*