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SCNpilot_expt_1000_bf_scaffold_2009_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 11043..11552

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYG0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 167.0
  • Bit_score: 301
  • Evalue 5.90e-79
Type VI secretion protein, VC_A0107 family {ECO:0000313|EMBL:EYR83979.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 167.0
  • Bit_score: 301
  • Evalue 8.30e-79
hypothetical protein; K11901 type VI secretion system protein ImpB similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 166.0
  • Bit_score: 257
  • Evalue 3.10e-66

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGCAGAGAGCGTTCAACAAAAACTGAAGAGAGTGCGCGCTCCGCGCGTCCACATTACCTATGACGTGGAGACCGAAGGCGCGCAGGTTCGCAAGGAACTGCCTTTCGTCGTCGGCGTGATCGGCGATTTCTCCGGCAAGCCCTACGAGCCGCTGAAGCCGTTGCGTGATCGTAAGTTCATCCAGATCGACCGCGACAACTTCGACGACGTCATGAAGCGCATGACGCCCGGCGCGGAATTCAAGGTCGACAACACGCTGGCCGGCGACGAGTCGCAGATGGCGGTTTCGCTGAAGTTCAACTCGATGGAAGACTTCGAGCCGGGCTCGATCGTCGACCAGGTCGAGCCGCTGCGCAAGCTGCTGGCCGTCCGCAACAAGCTGCGCGACCTGATGTCGAAGGTCGACCGTTCGGAAGAACTGGAAAGCCTGCTCGAAGAGGTTCTGCAGAACACCGAGAAGCTGTCGGCGCTCGCCGGCGAGCTGGGCAGCGAGAAGAAGGAGGGCTGA
PROTEIN sequence
Length: 170
MAESVQQKLKRVRAPRVHITYDVETEGAQVRKELPFVVGVIGDFSGKPYEPLKPLRDRKFIQIDRDNFDDVMKRMTPGAEFKVDNTLAGDESQMAVSLKFNSMEDFEPGSIVDQVEPLRKLLAVRNKLRDLMSKVDRSEELESLLEEVLQNTEKLSALAGELGSEKKEG*