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SCNpilot_expt_1000_bf_scaffold_1562_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1779..2942

Top 3 Functional Annotations

Value Algorithm Source
RND multidrug efflux membrane permease n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFE6_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 382.0
  • Bit_score: 568
  • Evalue 5.90e-159
RND multidrug efflux membrane permease {ECO:0000313|EMBL:EGP55047.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 382.0
  • Bit_score: 568
  • Evalue 8.30e-159
Putative component of multidrug efflux pump, acrB/acrD/acrF family similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 380.0
  • Bit_score: 565
  • Evalue 1.60e-158

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGCATTGTTGGCGGGGTGCCAGAAGGAAGAAGCCGCCGCGCCCCCGGCGATGCCCCCCGCCGAAGTCGGTATCGTGCTGGTTGCCGAAGAGGCGCTGCCGATCGTCAACGAATTGCCGGGCCGCATTGCGCCGACACGTCTGGCGGAAGTGCGTCCGCGCGTTTCCGGCATCCTTGTCGAGCGGGTTTTCGAGCAGGGTTCGCTGGTCAAGCAAGGTGACGTGCTTTATCGCATCGATCCCGCTCCCTTCAAAGTCCGTGTCGACAGCGCCCAGGCCCTGCTGCGCAAGGCCGAGGCCTCCCGCCTGCAGGCACGCCAGACGGCCGACCGCCAGGAACGCCTGCGCAAGTCGAACGTCGCCTCGCAGCAGGAAATCGACAATGCCGTCGCCCTGCTCGCCCAGGCGGATGCCGACGTCGCGGCGGCCCAGGCATCGCTGGCGGAAGCCCAGCTCAACCTGCAATATGCCGAAGTCAAGGCGCCGATCAGCGGCCGCATCGGCCGGGCGCTGATCACCGAAGGCGCGCTGGTCAACGCCAACGGCACCGAAAACCTGGCGACCATCCAGCAGCTCGATCCGATCTATGCCGACTTCACCCAGCCGGCTGCCGACCTCATCCGCCTGCGCAAGGCCTTGCAGGACGGTCAGCTGATGACCGGCAAGAACGAGGCGGAGGTGCAGCTGGTTCTGGACGACGGCACGCGTTACGGCGCGCCCGGCCGCCTGTTGTTTTCCGAAGCCGCCGTCGATGCGACGACCGGCCAGGTGACGTTGCGCGGCGAATTCCCCAATCCCGACGACGACCTGCTTCCGGGCATGTACGTGCGGGTGCAGATCGAGCAGGGCGTGGAAAAATCCGCCCTGGCCGTGCCGCAGCAATCCGTTCAGCGTGATGCCGGCGGCCAGGCCAGCGTCCTGATCGTCAATGCGGAAAACAAGGTCGAACAGCGCACTGTCGTCGTCGGCCGCATCATCGGCAACCGCTACGTCATTGCCCAGGGCCTCAAGGCCGGCGACCGCGTCGTCGCGGAAGGTTTCCAGAAGACCGCGCCCGGCGCCATCGTCAAGCCGGAACCGTGGGTCGCCACGCCGGCGGCAGAACCGGCCGGCGACGATTCGAAGACAAAATCCGCGGAACAGGCCGCGGCGGCGAGCGAGTAA
PROTEIN sequence
Length: 388
MALLAGCQKEEAAAPPAMPPAEVGIVLVAEEALPIVNELPGRIAPTRLAEVRPRVSGILVERVFEQGSLVKQGDVLYRIDPAPFKVRVDSAQALLRKAEASRLQARQTADRQERLRKSNVASQQEIDNAVALLAQADADVAAAQASLAEAQLNLQYAEVKAPISGRIGRALITEGALVNANGTENLATIQQLDPIYADFTQPAADLIRLRKALQDGQLMTGKNEAEVQLVLDDGTRYGAPGRLLFSEAAVDATTGQVTLRGEFPNPDDDLLPGMYVRVQIEQGVEKSALAVPQQSVQRDAGGQASVLIVNAENKVEQRTVVVGRIIGNRYVIAQGLKAGDRVVAEGFQKTAPGAIVKPEPWVATPAAEPAGDDSKTKSAEQAAAASE*