name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1562_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..232
|
GntR family transcriptional regulator n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LDT9_9PROT
Putative transcriptional regulator, LacI family {ECO:0000313|EMBL:AHK47203.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_2
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(272..1327)
|
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000361F81B
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1779..2942
|
RND multidrug efflux membrane permease n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFE6_RHIRD
RND multidrug efflux membrane permease {ECO:0000313|EMBL:EGP55047.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
Putative component of multidrug efflux pump, acrB/acrD/acrF family
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_4
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2946..3923)
|
Uncharacterized protein n=1 Tax=Cronobacter universalis NCTC 9529 RepID=K8DDG7_9ENTR
Tax=RBG_16_Gamma2_64_10_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4188..6092
|
RND multidrug efflux transporter n=2 Tax=Rhizobium radiobacter RepID=M8ACW0_RHIRD
RND multidrug efflux transporter {ECO:0000313|EMBL:EMS96088.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
Putative component of multidrug efflux pump, acrB/acrD/acrF family
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6106..6717
|
TetR family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFE4_RHIRD
TetR family transcriptional regulator {ECO:0000313|EMBL:EGP55045.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_7
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6934..7377
|
Transcriptional regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HKH6_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EPE99154.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
transcriptional regulator protein; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_8
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7387..9078
|
MFS permease n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5QHB5_9RHIZ
MFS permease {ECO:0000313|EMBL:EJT07303.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
rmrB; transporter
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_9
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9098..10171
|
hemolysin secretion protein D n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035FA72B
Multidrug resistance protein A homolog {ECO:0000313|EMBL:CDM57064.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
multidrug resistance efflux system protein
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_10
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10537..11907
|
EAL domain-containing protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q8H5_9RHIZ
EAL domain-containing protein {ECO:0000313|EMBL:AKI01277.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
diguanylate cyclase/phosphodiesterase
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_11
unknown
|
Not on your lists |
comp(12062..12262)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_12
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12660..14030
|
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000256|RuleBase:RU362045}; EC=2.4.1.15 {ECO:0000256|RuleBase:RU362045};; Osmoregulatory trehalose synthesis protein A {ECO:0000256|RuleBase:RU362045}; Trehalose-6-phosphate synthase {ECO:0000256|RuleBase:RU362045}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
otsA; protein OtsA; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15]
alpha,alpha-trehalose-phosphate synthase n=1 Tax=Sinorhizobium medicae RepID=UPI0003794E1A
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14109..15200)
|
3-isopropylmalate/3-methylmalate dehydrogenase {ECO:0000313|EMBL:CDX32909.1}; EC=1.1.1.83 {ECO:0000313|EMBL:CDX32909.1};; EC=1.1.1.85 {ECO:0000313|EMBL:CDX32909.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CFA968 related cluster n=1 Tax=unknown RepID=UPI0003CFA968
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_14
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15212..15592)
|
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KJS11726.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJS11726.1};; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Putative 2-(S)-hydroxypropyl-CoM dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDZ1_BREDI
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16115..17611
|
Betaine aldehyde dehydrogenase, NAD-dependent {ECO:0000313|EMBL:CDX15757.1}; EC=1.2.1.8 {ECO:0000313|EMBL:CDX15757.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CFB029 related cluster n=1 Tax=unknown RepID=UPI0003CFB029
aldehyde dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17818..18606)
|
LysR substrate-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC5_MESCW
LysR substrate-binding protein {ECO:0000313|EMBL:CDX32901.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18791..20284)
|
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:CDX32899.1}; EC=3.6.3.17 {ECO:0000313|EMBL:CDX32899.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter related protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC4_MESCW
ABC transporter
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20281..21372)
|
NHL repeat containing protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC3_MESCW
NHL repeat containing protein {ECO:0000313|EMBL:CDX32897.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
NHL repeat containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21369..22427)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC2_MESCW
Inner-membrane translocator {ECO:0000313|EMBL:CDX32895.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_20
unknown
|
Not on your lists |
22559..22750
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_21
unknown
|
Not on your lists |
23210..23428
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23473..24489)
|
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC1_MESCW
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDX32893.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_23
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24522..25511)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC0_MESCW
Inner-membrane translocator {ECO:0000313|EMBL:CDX46704.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
inner-membrane translocator
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25816..26379)
|
Putative choline kinase involved in LPS biosynthesis n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EG40_9RHIZ
Putative choline kinase involved in LPS biosynthesis {ECO:0000313|EMBL:EYR82874.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
choline/ethanolamine kinase
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_25
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26768..27031)
|
Rcorf38 n=1 Tax=Agrobacterium rhizogenes RepID=A8W001_AGRRH
Rcorf38 {ECO:0000313|EMBL:ABW33595.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_26
unknown
|
Not on your lists |
27132..27800
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27703..28983)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN12_9RHIZ
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EYR82872.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28976..29734)
|
Glycerol-3-phosphate regulon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDN3_9RHIZ
Transcriptional regulator DeoR family {ECO:0000313|EMBL:EYR82871.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
|
|
SCNpilot_expt_1000_bf_scaffold_1562_curated_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29724..30050)
|
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7XK46_RHIRD
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYR82870.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative substrate-binding component of ABC transporter
|