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SCNpilot_expt_1000_bf_scaffold_1562_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6106..6717

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFE4_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 202.0
  • Bit_score: 201
  • Evalue 5.90e-49
TetR family transcriptional regulator {ECO:0000313|EMBL:EGP55045.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 202.0
  • Bit_score: 201
  • Evalue 8.20e-49
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 202.0
  • Bit_score: 199
  • Evalue 9.10e-49

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAGGCGCACCAAGGCGGAAGCAGCGGAAACAAGGGCGGCAATTCTGGTTGCCGCCGAAAGGATGTTTTTCGAAAAGGGCGTCGCCAACAGCACGCTGGAAAACATCGCCACTGCCGCCGGGGTGACGCGCGGGGCCATCTATTGGCACTTCGCGAGCAAGACCGACCTCTTCCTCGAACTTTACAACACCGCCCGCCTTCCCGAACTCAGCATGATGGATCTGGAGAAGGTGGGGGTGGAAGGGGTCGATGCGCTCAATTTCATCGAGCACGCCATCTATGAATGGATCGACCTGCTGGCCGACGACATCCCGCGCCAGCGCATGTGGACGATCCTGATCCGTACGAATTTTACCGAAGAACTCGAGCGGGTCGCCACGGCGATGCAGGCGATCGAGGACAGCCAGACCGAGCTGCTTGTCGCCATCTTCGAACGCGCGGCCAGCACCGGTCGCCTGTCGCCGGCCTGGACCCCGGAACTGGCCAGCCTGACGCTGAAGTGGCACGCCAAGGGCATGTGCTGGGAATGGCTGCTCGAAGGCCAGAAATTCGACATCCGCACGCTCGGCCGCCAGAGCGTCGGCAAATTGTTCGAAGCGTTCCGCGCTTAA
PROTEIN sequence
Length: 204
MRRTKAEAAETRAAILVAAERMFFEKGVANSTLENIATAAGVTRGAIYWHFASKTDLFLELYNTARLPELSMMDLEKVGVEGVDALNFIEHAIYEWIDLLADDIPRQRMWTILIRTNFTEELERVATAMQAIEDSQTELLVAIFERAASTGRLSPAWTPELASLTLKWHAKGMCWEWLLEGQKFDIRTLGRQSVGKLFEAFRA*