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SCNpilot_expt_1000_bf_scaffold_1562_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4188..6092

Top 3 Functional Annotations

Value Algorithm Source
RND multidrug efflux transporter n=2 Tax=Rhizobium radiobacter RepID=M8ACW0_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 634.0
  • Bit_score: 979
  • Evalue 1.80e-282
RND multidrug efflux transporter {ECO:0000313|EMBL:EMS96088.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 634.0
  • Bit_score: 979
  • Evalue 2.60e-282
Putative component of multidrug efflux pump, acrB/acrD/acrF family similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 634.0
  • Bit_score: 978
  • Evalue 7.50e-283

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1905
GTGGTCGAAAACGTCGAACGTATCATGGCCGAGGAAGGCCTGTCGCCGCGGGAGGCAACCAGGAAGGCGATGTCGCAGATATCGGGGGCAATCATCGGCATCACGCTGGTGCTGACCGCCGTCTTCATTCCCATGGCCTTCTTCCCCGGCGCCGTCGGCGTCATCTACCAGCAGTTCAGCCTGACCATGGTCGTCTCGATCCTGTTCTCCGGTCTGCTCGCCCTGTCGCTGACGCCGGCGCTGTGCGCCACCTTCCTGAAACCCATCAAGCAGGGGCATCACCAGAAGAAAGGCTTTTTCGGCTGGTTCAACAGAAGGTTCGACGCAGGCACCCGCAAATATGCCGGCATGGTCGGCTTTCTGGTACACCGCGCCGGGCGCTTCATGGTCATCTATCTCGCCATCGTCGGCGGGCTGGCCTACCTCTTCCTGCAATTGCCGAGTTCGTTCCTGCCGAACGAGGACCAGGGCTACATCATCGTCGACATGCAGGCTCCGGCGGAAGCCAGCGCCAACCGCGCCCTCAGCGTCGCCGACCGCGTCGACGCGATTTTTGCGCAGGAACCCGCCATCGACCAGCGGACGATGATCAGCGGTTCCAGCTTCTCCGGTTTCGGCGACAATGCCGGCCTCGCCTTCGTGACGCTGAAGGACTGGAAGGAGCGCGGCCCCAACGATTCCGCCGAGGCGATCTCCGGCCGCGCCAACGGGCAGCTCTTCGGCCTTCGCGACGCCCTGACCTTTGCGTTGTCGCCGCCGCCGATCCAGGGCCTCGGCAACTCGGGCGGCTTCACCTTCCGTCTTCAGGACCGATCCGGCGCAGGTGCCACGGCGCTCAGTGCTGCGGCAGGCCAGTTGATGGCAACCGCCGGCCAAAGCCCCATCCTCGTAGGCATGCGTATCGAAGGCATGCCGGACGCGGCCCAGCTCAACCTCAACATCGATCGCGAGAAGGCCAACACCTTCGGCGTTACCTTTGCCGACATCAACTCGACGATTTCGGCCAACCTCGGCTCGACCTACATCAACGACTTCCCCAATGCCGGCCGCATGCAGCGCGTCACGGTGCAGGCTGACCAGTACCAGCGCATGAGCGCCGACGGCATCCTGAACCTCAACGTGCCGAACGCCGCCGGCGGCATGGTGCCGCTGCGCTCCTTCGCCACCGTCGACTGGACCAAGGGACCGGCGCAGGTGGTGGGCTACAACGGTTATCCGGCGGTGCGCATCGCCGGTAACGCCGCGCCCGGCTATTCCTCCGGTGCGGCGATCGCCGAAATGGAGCGGCTGGCGGCCCAATTGCCTACAGGCTTCGGCTATGAATGGTCGGGCCAGTCGCTGCAGGAAATCCAGTCCGGTTCGCAGGCGCCGATGCTCGTCGGCCTGACGATCCTGTTCATCTTCCTGCTTTTGGCCGCCCTTTACGAAAGCTGGAGCATCCCGTTGTCGGTCATGCTCGTGGTGCCGCTCGGCGTCATCGGCTCGGTCGTCGCCGTCATGCTGCGCGACATGCCGAACGACGTCTACTTCAAGGTCGGCCTGATCACCATCATCGGGCTTTCCGCCAAGAACGCCATCCTGATCGTCGAATTCGCCAAGGATCTGCGGGCGGAGGGCAAGCCCCTGCTGGAAGCGACGATCGAGGCCTGCCAGCTGCGGTTCCGGCCGATCCTGATGACCTCGCTCGCCTTCACGCTCGGCGTCGTGCCGCTGGCGATCGCCACCGGCGCCAGCGCCGCCAGCCAGAATGCCATCGGCACCGGCGTTCTCGGCGGCATGATCTCCGCCACCGTTCTCGCCATCTTCTTCGTTCCGGTTTTCTTCGTGTTCGTCATGAAGCTTTTCGGCAAGACCGGCCAGAAGAGCGAACCCGTGGCGGAGCAAACGGCGCAACCGGCGGAATGA
PROTEIN sequence
Length: 635
VVENVERIMAEEGLSPREATRKAMSQISGAIIGITLVLTAVFIPMAFFPGAVGVIYQQFSLTMVVSILFSGLLALSLTPALCATFLKPIKQGHHQKKGFFGWFNRRFDAGTRKYAGMVGFLVHRAGRFMVIYLAIVGGLAYLFLQLPSSFLPNEDQGYIIVDMQAPAEASANRALSVADRVDAIFAQEPAIDQRTMISGSSFSGFGDNAGLAFVTLKDWKERGPNDSAEAISGRANGQLFGLRDALTFALSPPPIQGLGNSGGFTFRLQDRSGAGATALSAAAGQLMATAGQSPILVGMRIEGMPDAAQLNLNIDREKANTFGVTFADINSTISANLGSTYINDFPNAGRMQRVTVQADQYQRMSADGILNLNVPNAAGGMVPLRSFATVDWTKGPAQVVGYNGYPAVRIAGNAAPGYSSGAAIAEMERLAAQLPTGFGYEWSGQSLQEIQSGSQAPMLVGLTILFIFLLLAALYESWSIPLSVMLVVPLGVIGSVVAVMLRDMPNDVYFKVGLITIIGLSAKNAILIVEFAKDLRAEGKPLLEATIEACQLRFRPILMTSLAFTLGVVPLAIATGASAASQNAIGTGVLGGMISATVLAIFFVPVFFVFVMKLFGKTGQKSEPVAEQTAQPAE*