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SCNpilot_expt_1000_bf_scaffold_1562_curated_28

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(28976..29734)

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate regulon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDN3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 252.0
  • Bit_score: 449
  • Evalue 2.60e-123
Transcriptional regulator DeoR family {ECO:0000313|EMBL:EYR82871.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 252.0
  • Bit_score: 449
  • Evalue 3.70e-123
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 250.0
  • Bit_score: 205
  • Evalue 1.60e-50

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGTCGAGTGAAATCCGCAAGGAGGTCATTCTGGAGCGGCTGGACCGCGATCAGCGCGTCAGCGTTGTGGAGCTTTCGGCGGAATTCGGCGTGTCCGGCGAAACGATCCGGCGCGATCTCAAGGATCTCGAGGCCGAAGGTGTCGTACGGCGCGTGCATGGCGGCGCCATCCCGGCCGGTCGTACTGCCGATACGCCGATCACCGAACGCATCAAGCTGAACGCGCTCGAAAAGGACGAGGTCGCCGGGCTGGCGCGCGGGCTGATCAACGACGATTGCGTCATCTTCCTCGACACCGGCACGACGACGCTGGCGCTGGCGAGACGCCTCATCGGCTTCAAGAAGCTCAGGCTCTATACAAACTCGCTGCGCATCGCCCAGGCCGCCTGCGAACATTTCGGCGTGCAGGTGCAGATGACGCCCGGCCGGCTCAGGCCGGTGGAGCAGGATCTCGTCGGCTACGATACGATCTCCTACATCCAGCAATTCCATTTCGACATGGTGTTCATGGGGGCCGCCGCCATCAATGCCGATTACGGTTTCATGGATTTTGAGGAGGACGAGGCGCGCATCCGCCAGAACTTGCTGGCCCAGACGTCGCGAAGCGTCATGCTGGCCGACCATTCGAAATTCGGCAAGGTCGGCAATGTCATCACCGCCCCGTTCAACCGGGTGCACACGCTCGTCACCGACCGCCGCCCGCCCGAAGCCGTCGAGACCGCGGTCAAGGCCGAACCGCTGGAGATCATCCATGCGTGA
PROTEIN sequence
Length: 253
MSSEIRKEVILERLDRDQRVSVVELSAEFGVSGETIRRDLKDLEAEGVVRRVHGGAIPAGRTADTPITERIKLNALEKDEVAGLARGLINDDCVIFLDTGTTTLALARRLIGFKKLRLYTNSLRIAQAACEHFGVQVQMTPGRLRPVEQDLVGYDTISYIQQFHFDMVFMGAAAINADYGFMDFEEDEARIRQNLLAQTSRSVMLADHSKFGKVGNVITAPFNRVHTLVTDRRPPEAVETAVKAEPLEIIHA*