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SCNpilot_expt_1000_bf_scaffold_1562_curated_29

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(29724..30050)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhizobium radiobacter RepID=K7XK46_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 88.0
  • Bit_score: 163
  • Evalue 1.20e-37
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYR82870.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 109.0
  • Bit_score: 166
  • Evalue 1.60e-38
putative substrate-binding component of ABC transporter similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 84.0
  • Bit_score: 113
  • Evalue 4.60e-23

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
GCCGTGATGTATCTCGGCCGCATCGTCGAACTGGCCGACAATGCCACCCTGTTCGAGCGCCCGCATCATCCCTATACGCGGGCATTGCTCAGTGCTATGCCGACCCTGGAGGACAATCGTTTTCCGCGTTCCCGCTACCTGCTGGACGGCGAGCCGCCGAGCCCGATCGAGTTGCCGTCGGGCTGTTCGTTCCGGTCCCGTTGTCCGCGCGCCCAGGGCGATTGTCAAAGGATCGACCCGCCGCTGCTCGTCATCGACGGCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACGGAGAAGGAGACCGCCGATGTCGAGTGA
PROTEIN sequence
Length: 109
AVMYLGRIVELADNATLFERPHHPYTRALLSAMPTLEDNRFPRSRYLLDGEPPSPIELPSGCSFRSRCPRAQGDCQRIDPPLLVIDGGXXXXXXXXXXXTEKETADVE*