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SCNpilot_expt_1000_bf_scaffold_1562_curated_16

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(17818..18606)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TDC5_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 262.0
  • Bit_score: 378
  • Evalue 4.50e-102
LysR substrate-binding protein {ECO:0000313|EMBL:CDX32901.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 262.0
  • Bit_score: 385
  • Evalue 6.80e-104
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 262.0
  • Bit_score: 378
  • Evalue 1.40e-102

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGCAGATCCGCGATCTGGAGGAGCAGGTCGGCATCAGCCTGTTCATTCGCACGCCGCAGCGCGCCAACCTGACACCGGAAGGCAAGATCCTCTTCGAGCAGATCCGGCGGGCAATGACCGACGTCCAGTCCGGCCTTGATCGTCTTACGGAAATTGCCGCCCAGCGCAAGGGCCGGGTGCACATCGCCTGCGCACCGACGCTCGCCGCCAGCCGTCTCGGCGACATCCTGGCCACCTTCAAGCTGCGCTATCCGCGCAGCATCGTCGAGGTGAAGGAAACGCCGCCGAGCGCGGCGCTGCTTCTGCTGCAGGAGCAGGAGGTGGAATTCTACATCGGGCCGGAAGTGCCGAACCTTGCCGATTTCCAGTTCGAATCCATCATCGACGATCCGCTGGTGGCCGCCGTGCCGCCGGATTTCGACAAGGGCCAGAAATCCTTCACCCTGTCGTCGTTTGCGGGCATTCCGCTCATTCTCCTGAACGACAAGACGGCGGTGCGCGGCCTGCTGGACCGGCTGGTCGCCGACGAAGGCATCAGTTTCAACGCGCAATACGAAGTGGAGAGCACGCAGACCGCCCTGGCGCTGGCGACCGCCGGCCTCGGCGTCTGCATCGTGCCGAGCATTGCGGTCAGTTCGCGCCGCGACGACGGACTGCGGGTCGTGCCGATCGCCCATCCCCAGGCCCGCCGCTCCGTCGGCATCATCACCGCCCGGGGTTATGTGCATCACAGCTTTTCCGAGCAGCTGATGAGCCTGATCCGCACCAATCTGCGGGAACTGGCCTGA
PROTEIN sequence
Length: 263
MQIRDLEEQVGISLFIRTPQRANLTPEGKILFEQIRRAMTDVQSGLDRLTEIAAQRKGRVHIACAPTLAASRLGDILATFKLRYPRSIVEVKETPPSAALLLLQEQEVEFYIGPEVPNLADFQFESIIDDPLVAAVPPDFDKGQKSFTLSSFAGIPLILLNDKTAVRGLLDRLVADEGISFNAQYEVESTQTALALATAGLGVCIVPSIAVSSRRDDGLRVVPIAHPQARRSVGIITARGYVHHSFSEQLMSLIRTNLRELA*