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SCNpilot_expt_1000_bf_scaffold_1562_curated_25

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(26768..27031)

Top 3 Functional Annotations

Value Algorithm Source
Rcorf38 n=1 Tax=Agrobacterium rhizogenes RepID=A8W001_AGRRH similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 87.0
  • Bit_score: 168
  • Evalue 2.40e-39
Rcorf38 {ECO:0000313|EMBL:ABW33595.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 87.0
  • Bit_score: 168
  • Evalue 3.30e-39
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 87.0
  • Bit_score: 77
  • Evalue 2.30e-12

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GTGCTTGCCGAACTGTTGCCCTTCGACGGCGAGGCGCTGCTGGCGATCGAGATGGCGACGGGCAAGCCGGATGCGCAGGTGCTGGCGCGTGCCCGCCTCTACGGCGCGGCGGACGACCTGATGTGGGCGCTCTGGGGTTTCATCCACGCGGCGCGCTCGCCGCGCAAGCATGTCGAGTTCTTCAAATATGCCGAATGGCGCCTGTTGCGGGCGCGCACCGTCGTCGAGGGGCCGCGTTATCAGGCGTGGCTGAAGCAGGTCTGA
PROTEIN sequence
Length: 88
VLAELLPFDGEALLAIEMATGKPDAQVLARARLYGAADDLMWALWGFIHAARSPRKHVEFFKYAEWRLLRARTVVEGPRYQAWLKQV*