ggKbase home page

SCNpilot_cont_750_bf_scaffold_2733_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2733_curated_1
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15..1004
DNA (990bp) protein (330aa)
Putative conjugal transfer protein trbG n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET13_BRASB
conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9
Putative conjugal transfer protein trbG {ECO:0000313|EMBL:ABQ39307.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_2733_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1001..2179
DNA (1179bp) protein (393aa)
Conjugal transfer protein TrbI n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9F4_9RHIZ
conjugal transfer protein TrbI
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AGK57161.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_bf_scaffold_2733_curated_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2191..2457
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V519_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53049.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2733_curated_4
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2440..3309)
DNA (870bp) protein (290aa)
Transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B113_9RHIZ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGK57159.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_bf_scaffold_2733_curated_5
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3324..4079)
DNA (756bp) protein (252aa)
Copper resistance protein CopB n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WV78_9RHIZ
Copper resistance protein CopB {ECO:0000313|EMBL:EIZ84343.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
copB; copper resistance protein B; K07233 copper resistance protein B
SCNpilot_cont_750_bf_scaffold_2733_curated_6
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4076..5971)
DNA (1896bp) protein (632aa)
Multicopper oxidase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FBF4_BURVI
Copper oxidase {ECO:0000313|EMBL:KHL14524.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
copA1; copper resistance protein A
SCNpilot_cont_750_bf_scaffold_2733_curated_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..7269)
DNA (606bp) protein (202aa)
Cytochrome c family protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV07_CAUSK
cytochrome c family protein
Cytochrome c family protein {ECO:0000313|EMBL:ABZ71476.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_750_bf_scaffold_2733_curated_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7500..8900)
DNA (1401bp) protein (467aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:KIJ72686.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
two component system histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-]
Two component system histidine kinase n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0W7_9PROT
SCNpilot_cont_750_bf_scaffold_2733_curated_9
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8897..9628)
DNA (732bp) protein (244aa)
transcriptional regulator n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DE53CC
Response regulator receiver domain protein {ECO:0000313|EMBL:EFH10323.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
two-component response regulator
SCNpilot_cont_750_bf_scaffold_2733_curated_10
unknown

Not on your lists

10274..10948
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_2733_curated_11
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11372..11644
DNA (273bp) protein (91aa)
Transposase orfA IS5 family element n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFC1_9SPHN
Transposase orfA IS5 family element {ECO:0000313|EMBL:KEQ50186.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
transposase
SCNpilot_cont_750_bf_scaffold_2733_curated_12
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12161..12823)
DNA (663bp) protein (221aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPZ9_XANP2
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:ABS70095.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Displaying 12 items

View Taxonomy