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SCNpilot_cont_750_bf_scaffold_1682_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1682_curated_1
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1334
DNA (1332bp) protein (444aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035E3D7E
SCNpilot_cont_750_bf_scaffold_1682_curated_2
unknown

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1365..1607
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1682_curated_3
unknown

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1817..1963
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1682_curated_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1960..2409
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AG3_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65612.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_750_bf_scaffold_1682_curated_5
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2662..2883
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMS3_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54061.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_1682_curated_6
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2894..3349
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3S0_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS15874.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_750_bf_scaffold_1682_curated_7
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3236..4528)
DNA (1293bp) protein (431aa)
Site-specific recombinase XerD n=1 Tax=Burkholderia sp. BT03 RepID=J2SFE1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJS44101.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
transposase B
SCNpilot_cont_750_bf_scaffold_1682_curated_8
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4797..5249
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237E5A8
Uncharacterized protein {ECO:0000313|EMBL:KGM85869.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1682_curated_9
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5246..5572
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KEQ52199.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCNpilot_cont_750_bf_scaffold_1682_curated_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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5714..6286
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQD5_DELSC
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_750_bf_scaffold_1682_curated_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6290..7234
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQD6_DELSC
Uncharacterized protein {ECO:0000313|EMBL:GAO20884.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein; K06915
SCNpilot_cont_750_bf_scaffold_1682_curated_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7231..8703
DNA (1473bp) protein (491aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1DE71_9ZZZZ
regulatory protein MerR
Tax=BJP_IG2102_Gammaproteobacteria_62_140
SCNpilot_cont_750_bf_scaffold_1682_curated_13
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8777..9610
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EA3FB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39684.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_750_bf_scaffold_1682_curated_14
unknown

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9568..9798
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1682_curated_15
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9958..11922
DNA (1965bp) protein (655aa)
DNA methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI000373832A
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ44346.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
C-5 cytosine-specific DNA methylase
SCNpilot_cont_750_bf_scaffold_1682_curated_16
unknown

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11919..12125
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1682_curated_17

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12298..13167
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000315820C
Antirestriction protein ardC {ECO:0000313|EMBL:EQD47743.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 17 items

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