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SCNpilot_cont_750_bf_scaffold_959_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_959_curated_1
Acetobacter pasteurianus, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(246..1925)
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein n=11 Tax=Acetobacter pasteurianus RepID=C7JBD7_ACEP3
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH98364.1}; TaxID=634452 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153).;"
SCNpilot_cont_750_bf_scaffold_959_curated_2
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2244..4937)
DNA (2694bp) protein (898aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036CA028
Uncharacterized protein {ECO:0000313|EMBL:CDI02990.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_959_curated_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4937..5374)
DNA (438bp) protein (146aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CP37_9BURK
FcbC protein {ECO:0000313|EMBL:BAQ48344.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_750_bf_scaffold_959_curated_4
unknown

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comp(5371..6132)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_959_curated_5
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6238..7044
DNA (807bp) protein (269aa)
Glutamine amidotransferase, class I n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQK0_GRABC
glutamine amidotransferase, class I
Glutamine amidotransferase, class I {ECO:0000313|EMBL:ABI62902.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_959_curated_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7156..7929)
DNA (774bp) protein (258aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FUT6_ACICJ
Iron-sulfur binding oxidoreductase {ECO:0000313|EMBL:GAN77445.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_959_curated_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8125..8796)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003177FE3
Mitochondrial import inner membrane translocase subunit Tim44 {ECO:0000313|EMBL:GAN76103.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative transporter
SCNpilot_cont_750_bf_scaffold_959_curated_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8896..9450
DNA (555bp) protein (185aa)
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EFH11891.1}; EC=3.1.3.46 {ECO:0000313|EMBL:EFH11891.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
fructose-2,6-bisphosphatase (EC:3.1.3.46 5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLD5_9PROT
SCNpilot_cont_750_bf_scaffold_959_curated_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9707..10234
DNA (528bp) protein (176aa)
Protein-export protein SecB n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZLH7_9PROT
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB
SCNpilot_cont_750_bf_scaffold_959_curated_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10411..11556
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUI5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86559.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative nonspecific lipid-transfer protein
SCNpilot_cont_750_bf_scaffold_959_curated_11
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11559..11966
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRD0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF86560.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_959_curated_12
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12240..13787
DNA (1548bp) protein (516aa)
Endopeptidase degP {ECO:0000313|EMBL:AHJ62150.1}; EC=3.4.21.- {ECO:0000313|EMBL:AHJ62150.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Endopeptidase degP n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV72_GRABC
SCNpilot_cont_750_bf_scaffold_959_curated_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14058..17996
DNA (3939bp) protein (1313aa)
Putative sensor histidine kinase with multiple PAS and a response regulator receiver domain (Modular protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXW6_AZOBR
putative sensor histidine kinase with multiple PAS and a response regulator receiver domain (modular protein)
Putative sensor histidine kinase with multiple PAS and a response regulator receiver domain (Modular protein) {ECO:0000313|EMBL:CCD02725.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Displaying 13 items

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