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SCNpilot_cont_750_bf_scaffold_672_curated

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Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_672_curated_1
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4); K00957 sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
Sulfate adenylate transferase small subunit n=1 Tax=Sphingomonas elodea RepID=A4UTT3_SPHEL
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_750_bf_scaffold_672_curated_2
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373..2445)
DNA (2073bp) protein (691aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037C2C5A
Uncharacterized protein {ECO:0000313|EMBL:KJB94374.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
regulator protein
SCNpilot_cont_750_bf_scaffold_672_curated_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2551..3933)
DNA (1383bp) protein (461aa)
glutamate-cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate/cysteine ligase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZJP2_GLUDA
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAN76705.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_672_curated_4
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3968..4675)
DNA (708bp) protein (236aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=290633 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans).;"
Ribosomal RNA small subunit methyltransferase E n=2 Tax=Gluconobacter thailandicus RepID=M9M440_GLUTH
SCNpilot_cont_750_bf_scaffold_672_curated_5
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4694..5689
DNA (996bp) protein (332aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZJP0_GLUDA
4-hydroxybenzoate polyprenyl transferase {ECO:0000313|EMBL:GAN76703.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_672_curated_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5686..6342
DNA (657bp) protein (219aa)
ribosomal protein L11 methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQ14_GRABC
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:GAN76702.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_672_curated_7
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6406..8151)
DNA (1746bp) protein (582aa)
beta-lactamase n=1 Tax=Pseudomonas pelagia RepID=UPI0003999354
Beta-lactamase {ECO:0000313|EMBL:KFJ90971.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_672_curated_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8162..9025)
DNA (864bp) protein (288aa)
Metallo-beta-lactamase family protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TK13_TISMK
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:AFK53101.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_672_curated_9
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9204..9932
DNA (729bp) protein (243aa)
Peroxiredoxin n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKN6_TISMK
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFK53324.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_672_curated_10
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9929..10501
DNA (573bp) protein (191aa)
Transcriptional regulator, ArsR family n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKN5_TISMK
Transcriptional regulator ArsR {ECO:0000313|EMBL:GAN76985.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
bigR; ArsR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_672_curated_11
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10498..10920
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8S9_METRJ
Putative transmembrane protein {ECO:0000313|EMBL:AIQ91530.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein; K07112
SCNpilot_cont_750_bf_scaffold_672_curated_12
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10917..11348
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M8T0_METRJ
Uncharacterized protein {ECO:0000313|EMBL:AIQ91531.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
hypothetical protein; K07112
SCNpilot_cont_750_bf_scaffold_672_curated_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11360..12148
DNA (789bp) protein (263aa)
Transmembrane protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKN4_TISMK
Uncharacterized protein {ECO:0000313|EMBL:GAN76986.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transmembrane protein
SCNpilot_cont_750_bf_scaffold_672_curated_14
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12221..13897)
DNA (1677bp) protein (559aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RHC2_9PROT
SCNpilot_cont_750_bf_scaffold_672_curated_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14027..14401
DNA (375bp) protein (125aa)
DGPFAETKE family protein n=2 Tax=Sphingomonas wittichii RepID=A5V5B0_SPHWW
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABQ67476.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_750_bf_scaffold_672_curated_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14398..15639
DNA (1242bp) protein (414aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TU12_9PROT
Putative RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EDP63853.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_750_bf_scaffold_672_curated_17
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15745..16170
DNA (426bp) protein (142aa)
dehydrogenase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000363124C
DGPFAETKE family protein
Dgpfaetke family protein {ECO:0000313|EMBL:EEE02507.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
SCNpilot_cont_750_bf_scaffold_672_curated_18
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16185..16613
DNA (429bp) protein (143aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y993_NITMU
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABB74678.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_750_bf_scaffold_672_curated_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16717..17568
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035F4987
amidohydrolase 2; K07046
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_750_bf_scaffold_672_curated_20
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17900..19309
DNA (1410bp) protein (470aa)
ATP-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003788730
ATP-binding protein {ECO:0000313|EMBL:KJC53962.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_672_curated_21
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19281..19928)
DNA (648bp) protein (216aa)
alkB2; alpha-ketoglutarate-dependent dioxygenase alkB (EC:1.14.11.-); K03919 alkylated DNA repair protein [EC:1.14.11.-]
Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions {ECO:0000313|EMBL:ABF12127.1}; EC=1.14.11.- {ECO:0000313|EMBL:ABF12127.1};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LCJ9_RALME
SCNpilot_cont_750_bf_scaffold_672_curated_22
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19980..21224)
DNA (1245bp) protein (415aa)
Putative substrate-binding protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IDX0_METNO
putative substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Putative substrate-binding protein {ECO:0000313|EMBL:ACL55692.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_672_curated_23
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21473..23164
DNA (1692bp) protein (564aa)
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:EHN11932.1}; EC=2.3.2.2 {ECO:0000313|EMBL:EHN11932.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Gamma-glutamyltranspeptidase n=1 Tax=Patulibacter medicamentivorans RepID=H0E323_9ACTN
gamma-glutamyltranspeptidase
SCNpilot_cont_750_bf_scaffold_672_curated_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23330..24355
DNA (1026bp) protein (342aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZZ1_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EIM29533.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_672_curated_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24501..25700
DNA (1200bp) protein (400aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0IY54_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN76693.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_672_curated_26
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25701..28901)
DNA (3201bp) protein (1067aa)
DEAD/DEAH box helicase; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M459_METRJ
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACB26354.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_750_bf_scaffold_672_curated_27
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28991..29422)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Spermophilus tridecemlineatus RepID=I3M9I7_SPETR
Uncharacterized protein {ECO:0000313|EMBL:KIF70607.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
SCNpilot_cont_750_bf_scaffold_672_curated_28
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29551..30393)
DNA (843bp) protein (281aa)
type 11 methyltransferase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036277FC
Uncharacterized protein {ECO:0000313|EMBL:KGM33700.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
type 11 methyltransferase
SCNpilot_cont_750_bf_scaffold_672_curated_29
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30390..31358)
DNA (969bp) protein (323aa)
Glycosyl transferase, group 1 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ35_METS4
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACA16166.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_672_curated_30
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31355..32383)
DNA (1029bp) protein (343aa)
Glycosyl transferase family 1 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTV2_9RHIZ
Glycosyl transferase family 1 {ECO:0000313|EMBL:ESX82910.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
glycosyltransferase
Displaying items 1-30 of 56 in total

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