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SCNpilot_cont_750_bf_scaffold_502_curated

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_502_curated_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_502_curated_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(324..2090)
DNA (1767bp) protein (589aa)
Transporter, major facilitator family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A877_9PROT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHL96044.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
major facilitator superfamily protein
SCNpilot_cont_750_bf_scaffold_502_curated_3
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..3137)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXE0_AZOC5
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:BAF87488.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_502_curated_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3189..3827)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003764B6A
Transcriptional regulator {ECO:0000313|EMBL:EWY40239.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_502_curated_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3942..5135
DNA (1194bp) protein (398aa)
Auxiliary transport protein, membrane fusion protein (MFP) family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLR3_9PROT
Auxiliary transport protein, membrane fusion protein (MFP) family protein {ECO:0000313|EMBL:EFH11756.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
SCNpilot_cont_750_bf_scaffold_502_curated_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5198..6700
DNA (1503bp) protein (501aa)
Drug resistance MFS transporter, drug:H+ antiporter-2 family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3M9_9PROT
Drug resistance MFS transporter, drug:H+ antiporter-2 family {ECO:0000313|EMBL:EHL98899.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
multidrug resistance efflux pump (EmrB-like)
SCNpilot_cont_750_bf_scaffold_502_curated_7
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6716..8011)
DNA (1296bp) protein (432aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QNV8_METTR
putative DNA methylase
Putative DNA methylase {ECO:0000313|EMBL:BAJ80482.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_bf_scaffold_502_curated_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..8540)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYV8_9PROT
Acyl carrier protein {ECO:0000313|EMBL:KJB94947.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_502_curated_9
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8919..9404
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QFW0_GLUHA
Uncharacterized protein {ECO:0000313|EMBL:EFG84016.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_502_curated_10
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9490..10269)
DNA (780bp) protein (260aa)
short chain dehydrogenase/reductase family oxidoreductase (EC:1.1.1.100); K07124
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:AEK61922.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEK61922.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ABW6_COLFT
SCNpilot_cont_750_bf_scaffold_502_curated_11
unknown

Not on your lists

10437..10727
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_502_curated_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10893..11651
DNA (759bp) protein (253aa)
hypothetical protein; K06152 gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TW49_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KIZ40259.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCNpilot_cont_750_bf_scaffold_502_curated_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11656..13422
DNA (1767bp) protein (589aa)
hypothetical protein; K06151 gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6H6_BRAJP
Gluconate 2-dehydrogenase flavoprotein {ECO:0000313|EMBL:CEG06987.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_750_bf_scaffold_502_curated_14
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13419..14645
DNA (1227bp) protein (409aa)
Cytochrome c, mono-and diheme variants family n=1 Tax=Pantoea sp. GM01 RepID=J3DGD6_9ENTR
Cytochrome c, mono-and diheme variants family {ECO:0000313|EMBL:EJL91424.1}; Flags: Precursor;; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
cytochrome-c oxidase
SCNpilot_cont_750_bf_scaffold_502_curated_15
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14984..17104)
DNA (2121bp) protein (707aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
Catalase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HMF6_GLUDA
SCNpilot_cont_750_bf_scaffold_502_curated_16
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17249..18526)
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; Short=SerRS {ECO:0000255|HAMAP-Rule:MF_00176};; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000255|HAMAP-Rule:MF_00176}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Serine--tRNA ligase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=SYS_GRABC rbh
SCNpilot_cont_750_bf_scaffold_502_curated_17
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18531..19316)
DNA (786bp) protein (262aa)
preprotein translocase subunit TatC n=1 Tax=Acetobacter pasteurianus RepID=UPI00031B333F
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
tatC; Sec-independent protein translocase TatC; K03118 sec-independent protein translocase protein TatC
SCNpilot_cont_750_bf_scaffold_502_curated_18
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19353..20051)
DNA (699bp) protein (233aa)
Putative sec-independent protein translocase protein tatB n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HLG7_GLUDA
tatB; sec-independent protein translocase tatB; K03117 sec-independent protein translocase protein TatB
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
SCNpilot_cont_750_bf_scaffold_502_curated_19
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20120..22423
DNA (2304bp) protein (768aa)
peptidase S45 penicillin amidase; K01434 penicillin amidase [EC:3.5.1.11]
Peptidase S45 penicillin amidase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFQ8_METNO
Peptidase S45 penicillin amidase {ECO:0000313|EMBL:ACL59618.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_502_curated_20
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22668..23264)
DNA (597bp) protein (199aa)
Putative membrane-associated alkaline phosphatase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU12_GRABC
Alkaline phosphatase DedA {ECO:0000313|EMBL:GAN78332.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative membrane-associated alkaline phosphatase
SCNpilot_cont_750_bf_scaffold_502_curated_21
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23343..23834
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5U9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78331.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_502_curated_22
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23928..25610
DNA (1683bp) protein (561aa)
Acetolactate synthase large subunit n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UFA1_ADVKW
Putative acetolactate synthase large subunit {ECO:0000313|EMBL:AHG65124.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
acetolactate synthase large subunit
SCNpilot_cont_750_bf_scaffold_502_curated_23
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25648..26229
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HWN9_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL46465.1}; Flags: Precursor;; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
SCNpilot_cont_750_bf_scaffold_502_curated_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26341..27207
DNA (867bp) protein (289aa)
2-methylisocitrate lyase {ECO:0000313|EMBL:CBS88534.1}; EC=4.1.3.30 {ECO:0000313|EMBL:CBS88534.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
2-methylisocitrate lyase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB93_AZOL4
2-methylisocitrate lyase (modular protein)
SCNpilot_cont_750_bf_scaffold_502_curated_25
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27212..28834
DNA (1623bp) protein (541aa)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TUX2_TISMK
5-oxoprolinase
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AFK56560.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_502_curated_26
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28831..30894
DNA (2064bp) protein (688aa)
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:EFH11516.1}; EC=3.5.2.9 {ECO:0000313|EMBL:EFH11516.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14]
Hydantoinase/oxoprolinase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMF0_9PROT
SCNpilot_cont_750_bf_scaffold_502_curated_27
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30976..31572
DNA (597bp) protein (199aa)
cysteine hydrolase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036D0180
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ACA16405.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_502_curated_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31700..33523)
DNA (1824bp) protein (608aa)
Transglycosylase SLT domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZX55_9PROT
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EHM02445.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
transglycosylase SLT family protein
SCNpilot_cont_750_bf_scaffold_502_curated_29
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33632..35911)
DNA (2280bp) protein (760aa)
penicillin-binding protein, 1A family protein; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D19E4
Penicillin-binding protein {ECO:0000313|EMBL:KJR65148.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
SCNpilot_cont_750_bf_scaffold_502_curated_30
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35908..41013)
DNA (5106bp) protein (1702aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000378A383
Uncharacterized protein {ECO:0000313|EMBL:KJR65149.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein; K06894
Displaying items 1-30 of 66 in total

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