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SCNpilot_cont_750_bf_scaffold_752_curated

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_752_curated_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_752_curated_2
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1393)
DNA (1290bp) protein (430aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
Putative phosphatidylserine decarboxylase proenzyme n=1 Tax=Sulfurimonas gotlandica GD1 RepID=H1FV10_9HELI
SCNpilot_cont_750_bf_scaffold_752_curated_3
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1396..1773)
DNA (378bp) protein (126aa)
Copper-translocating P-type ATPase n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EAN0_METSZ
copper-translocating P-type ATPase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_750_bf_scaffold_752_curated_4
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1770..4316)
DNA (2547bp) protein (849aa)
ATPase P (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037BE7DD
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_750_bf_scaffold_752_curated_5
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..4535)
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003775C34
YHS domain protein {ECO:0000313|EMBL:AJZ56854.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCNpilot_cont_750_bf_scaffold_752_curated_6
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4912..5949)
DNA (1038bp) protein (346aa)
Putative zinc-dependent alcohol dehydrogenase (Oxidoreductase) L-iditol 2-dehydrogenase {ECO:0000313|EMBL:CCD87786.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCD87786.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000380540A
zinc-dependent alcohol dehydrogenase
SCNpilot_cont_750_bf_scaffold_752_curated_7
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5998..6807)
DNA (810bp) protein (270aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
enoyl-(acyl carrier protein) reductase (EC:1.3.1.9); K00209 enoyl-[acyl-carrier-protein] reductase (NADPH2, B-specific) [EC:1.3.1.10]
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN48_9PROT
SCNpilot_cont_750_bf_scaffold_752_curated_8
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6789..8021)
DNA (1233bp) protein (411aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YN00_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KCZ62026.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
SCNpilot_cont_750_bf_scaffold_752_curated_9
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8035..9801)
DNA (1767bp) protein (589aa)
Poly-beta-hydroxybutyrate polymerase domain containing protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L7V0_9PROT
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:KJZ05046.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
poly(3-hydroxyalkanoate) polymerase
SCNpilot_cont_750_bf_scaffold_752_curated_10
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9807..10811)
DNA (1005bp) protein (335aa)
phosphate butyryltransferase (EC:2.3.1.19); K00625 phosphate acetyltransferase [EC:2.3.1.8]
Phosphate butyryltransferase {ECO:0000313|EMBL:CCA93170.1}; EC=2.3.1.19 {ECO:0000313|EMBL:CCA93170.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Phosphate butyryltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP18_9SPHN
SCNpilot_cont_750_bf_scaffold_752_curated_11
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10808..12619)
DNA (1812bp) protein (604aa)
UPI0003D5EE16 related cluster n=1 Tax=unknown RepID=UPI0003D5EE16
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:ETI60502.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_752_curated_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..12953)
DNA (324bp) protein (108aa)
UPI0003D5C015 related cluster n=1 Tax=unknown RepID=UPI0003D5C015
Uncharacterized protein {ECO:0000313|EMBL:ETI60503.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_752_curated_13
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12946..13281)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IJ21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11725.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
Cation transporting P-type ATPase
SCNpilot_cont_750_bf_scaffold_752_curated_14
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13297..13749)
DNA (453bp) protein (151aa)
UPI0003D5994F related cluster n=1 Tax=unknown RepID=UPI0003D5994F
Uncharacterized protein {ECO:0000313|EMBL:ETI60522.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCNpilot_cont_750_bf_scaffold_752_curated_15
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13812..14999)
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C682
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EXS68733.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
SCNpilot_cont_750_bf_scaffold_752_curated_16
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15029..15715)
DNA (687bp) protein (229aa)
acetoacetyl-CoA reductase; K00023 acetoacetyl-CoA reductase [EC:1.1.1.36]
Acetoacetyl-CoA reductase n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LBN7_9PROT
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EKF06350.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
SCNpilot_cont_750_bf_scaffold_752_curated_17
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15766..16428)
DNA (663bp) protein (221aa)
UPI0003D5BFF1 related cluster n=1 Tax=unknown RepID=UPI0003D5BFF1
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:ETI60505.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_750_bf_scaffold_752_curated_18
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16641..17111
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INZ5_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93147.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_752_curated_19
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17778..19346
DNA (1569bp) protein (523aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLS3_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KDB04693.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
cyclopropane-fatty-acyl-phospholipid synthase
SCNpilot_cont_750_bf_scaffold_752_curated_20
unknown

Not on your lists

19370..19753
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_752_curated_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19872..20498
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035D10A7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_752_curated_22
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20649..22097
DNA (1449bp) protein (483aa)
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
ATP synthase subunit beta n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX0_BEII9
SCNpilot_cont_750_bf_scaffold_752_curated_23
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22094..22564
DNA (471bp) protein (157aa)
F0F1 ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
ATP synthase epsilon chain n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX1_BEII9
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_750_bf_scaffold_752_curated_24
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22561..22851
DNA (291bp) protein (97aa)
Putative H(+)-transporting ATP synthase, gene 1 protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX2_BEII9
putative H(+)-transporting ATP synthase, gene 1 protein; K02116 ATP synthase protein I
Putative H(+)-transporting ATP synthase, gene 1 protein {ECO:0000313|EMBL:ACB96347.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_750_bf_scaffold_752_curated_25
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22848..23144
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G445_9BURK
N-ATPase, AtpR subunit {ECO:0000313|EMBL:AJZ56586.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
lipoprotein
SCNpilot_cont_750_bf_scaffold_752_curated_26
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23141..23842
DNA (702bp) protein (234aa)
F0F1 ATP synthase subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX3_BEII9
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_750_bf_scaffold_752_curated_27
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23839..24087
DNA (249bp) protein (83aa)
F0F1 ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase F0, C subunit n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX4_BEII9
ATP synthase F0, C subunit {ECO:0000313|EMBL:ACB96349.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_750_bf_scaffold_752_curated_28
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24101..24868
DNA (768bp) protein (256aa)
H+transporting two-sector ATPase subunit B/B'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b 3 n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) PF3_BEII9">RepID=ATPF3_BEII9
ATP synthase subunit b 3 {ECO:0000255|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b 3 {ECO:0000255|HAMAP-Rule:MF_01398}; ATPase subunit I 3 {ECO:0000255|HAMAP-Rule:MF_01398}; F-type ATPase subunit b 3 {ECO:0000255|HAMAP-Rule:MF_01398}; Short=F-ATPase subunit b 3 {ECO:0000255|HAMAP-Rule:MF_01398};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;
SCNpilot_cont_750_bf_scaffold_752_curated_29
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24865..26403
DNA (1539bp) protein (513aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
ATP synthase subunit alpha n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX6_BEII9
SCNpilot_cont_750_bf_scaffold_752_curated_30
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26400..27260
DNA (861bp) protein (287aa)
H+transporting two-sector ATPase subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
H+transporting two-sector ATPase gamma subunit n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJX7_BEII9
H+transporting two-sector ATPase gamma subunit {ECO:0000313|EMBL:ACB96352.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
Displaying items 1-30 of 51 in total

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