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SCNpilot_cont_750_bf_scaffold_593_curated_20

Organism: scnpilot_dereplicated_Rhodospirillales_2

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 9 / 38
Location: 31102..31455

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Xanthomonas axonopodis RepID=UPI0003179916 similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 91.0
  • Bit_score: 125
  • Evalue 4.00e-26
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 91.0
  • Bit_score: 121
  • Evalue 1.40e-25
Conjugal transfer protein TrbD {ECO:0000313|EMBL:ADP70348.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 91.0
  • Bit_score: 121
  • Evalue 6.30e-25

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GTGAGCCTGCGGCGCACACCTTTCTTCCGGGTCCTGCACCGTCCGAAGCTGTTCCTGGGCGGTGAGCGAGAGCCGACGCTCATGATGGCGATCGTCGCGGCCGGACTTGCCGTCAGCGGGCAGAATCTGGTCACGCTCACCGTGGCCGCGGTCCTCTGGTTCGGATGCATCGGTATCTTCCGCCAGATTGCAAAGGCAGACCCGCAGATGAGCCGGGTCTACCTGCGGCAGCTCAAATACCGAGGCTACTACCCCGCACGCTCCCGGCCTTACCGAGGCGCGGAGGCCTCCTCGCGCGGCTTTACCGTCGGGCTCGCGGCAGTGGCGGTCATGCTGATGGTGTGGGTGCTCTGA
PROTEIN sequence
Length: 118
VSLRRTPFFRVLHRPKLFLGGEREPTLMMAIVAAGLAVSGQNLVTLTVAAVLWFGCIGIFRQIAKADPQMSRVYLRQLKYRGYYPARSRPYRGAEASSRGFTVGLAAVAVMLMVWVL*