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SCNpilot_cont_750_bf_scaffold_593_curated_23

Organism: scnpilot_dereplicated_Rhodospirillales_2

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 9 / 38
Location: 34779..36119

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbL n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZH2_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 412.0
  • Bit_score: 332
  • Evalue 8.20e-88
P-type conjugative transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 412.0
  • Bit_score: 332
  • Evalue 2.60e-88
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ADP71007.1}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.1
  • Coverage: 412.0
  • Bit_score: 332
  • Evalue 1.20e-87

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
TTGCCCGCCCCCTTCGTCGTCTACTCAACCAACCACTCCGAGATCGAGCGCATTCCCTCCGCTTGGCGATCTTCCTCCTACTACCGGTGGGAAGAAATTTTGAGAACCCCGCTCATTCGGCTGGGTCTACTGTCGGTGATTCTGATCCTTGCCGCAGAGTCATCGGCGCATGCGCAAGCGGTGAATGTCCTTGATCAAGTCGTATCGCAGTTCCAGCTGCGATCTGCAGGTTGGCAAGCGGGCCTGACTTCATTTGCCATCAACACCTTCGGCATTCTTGCCGGCATCGATCTCACCTGGTCAGCGCTTCGACTCGCTTTCAAGGGGGCCGACGTCAGCGAGTGGCTGGCCGAGATCGTCAGTCAGATCCTCTTTCTTGGGTTCTTCCTTGCGCTGCTACAAAACGCAGTCACCTGGGACACCGCAATCGTCAACAGCTTTAGGCAAGCTGCGAGTTCTGCCGGCGGTGTGGGAATCGCACCTTCGGATGTGTTCGCAGCAGGTGTGAAATTGGCCGCCACGGTGCTCAGCCAAATGAGCATCTGGCACCCAGAAGCAAGCGCCGGCCTCATTATCGCAGGCCTCATCATCGAGGTGTGTTTCGCGCTAATGGCAGCGTTCATGGTGCTGGCTCTGGTCGAGAGCTACCTCGTCATCTCCATGGGCGTCTTGTTCATGGCCTTTGGTGGATCACGCTGGACCAAGGACATCGCCGTCAGCACGGTGCGCTATGCCGTTTCGGTGGGTGCGAAGCTGTTCGTCCTGCAGCTGTTAATCGGCATTGGGACGGGGCTCATCCAGTCCTGGGCCGACTCCTTCGTCGATGTCACTGATGCCTCTCTCTGCATCCTTATAGGTTGCTCGATCGTGATGCTGGCACTGGTAAAGGTCCTCCCGGATACCATCCAGAGAATCGTCAACGGATCCAGCATGGCAACCGGCTCAGCCCTGACAGGAGCGGCCGCGGCTGTTGGCGGTGCCGTAGGTGGCGTCGGTCTCGGTATGCTGGGCGCAGGCGCGATGACCGGGCAAGCTTATCAGCTCGCGTCGGCGCAGATGCAGGCTGCCGACAACAAGGCCGCTGAAGCGAATGGGGGACAGGCGCCGGAACGCTCTCGCATTGCTCGTGCGGCTGCCCTCACGGGCGGCACGGCCCGCAACATGGCCGCAGCACCCGCCCGAGATGTTGGGCGCAGGCTGGCCGGTGACATCGGCTCGCGTCATGGCGTCGCGACCTGGCGCATGGCGGCCGACCTCGCCAACCGGCGTCGCCTGTTGGACGACGATGCCGGCAAGCCGAAGCCGCCTCAGTCGTCCTCAACAGCCAACACCATCAGTTAA
PROTEIN sequence
Length: 447
LPAPFVVYSTNHSEIERIPSAWRSSSYYRWEEILRTPLIRLGLLSVILILAAESSAHAQAVNVLDQVVSQFQLRSAGWQAGLTSFAINTFGILAGIDLTWSALRLAFKGADVSEWLAEIVSQILFLGFFLALLQNAVTWDTAIVNSFRQAASSAGGVGIAPSDVFAAGVKLAATVLSQMSIWHPEASAGLIIAGLIIEVCFALMAAFMVLALVESYLVISMGVLFMAFGGSRWTKDIAVSTVRYAVSVGAKLFVLQLLIGIGTGLIQSWADSFVDVTDASLCILIGCSIVMLALVKVLPDTIQRIVNGSSMATGSALTGAAAAVGGAVGGVGLGMLGAGAMTGQAYQLASAQMQAADNKAAEANGGQAPERSRIARAAALTGGTARNMAAAPARDVGRRLAGDIGSRHGVATWRMAADLANRRRLLDDDAGKPKPPQSSSTANTIS*