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SCNpilot_cont_750_bf_scaffold_414_curated_22

Organism: scnpilot_dereplicated_Rhodospirillales_2

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 9 / 38
Location: 32139..33845

Top 3 Functional Annotations

Value Algorithm Source
phytochrome; K07675 two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 293.0
  • Bit_score: 238
  • Evalue 6.50e-60
Phytochrome n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q132I0_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 293.0
  • Bit_score: 238
  • Evalue 2.10e-59
Phytochrome {ECO:0000313|EMBL:ABE41009.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 293.0
  • Bit_score: 238
  • Evalue 2.90e-59

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
GTGCCCTCCATCCGCGTGCTGATGCTGGGGCTCACCTTCGCGATCGTCCTGCCGCTGATGAGCTTCTCCGCCTATTTGGTGATGGAAGCCGCGCAGCGCGCGCAGTCGCTGATGGAAAGCGAGCTGCGCGAACGCGCGCGGCTGACCGCCGCCTCGATCGACCAGATGCTCGTGGTCGTGCGCAGCCGGCTGTTCGCCATGGCGGCCAGCCCGTCGCTCGCGAGCGGGGATTTCGACGCGTTCCACGACCGGATCGCGGATCTCGTGCGCCCGCGCTCGCTGATCGTGGTGCTCACGGACGCGGCCGGCCACACGATGCTCAGCACCGCCGTCCCGTTCGGCACGCCCCTGCCGGACTTCCCGCTGCAGGCCGGGTTCCGGCGCGTGATCGATTCGGGCGTGCCCACCATCTCCGGCTTCGTGCCGGATCCGATCACCCACCGGCCGGCGCTCTACATGTCCGTGCTGGTGCCGACGACCGAACATGGCCCCTGCGTCCTGAGCATCGACGTGTCCGGCGTGCTGCAGGACCTGCTGGAACAGGACCGGTTGCAGGACGGCTGGGCCGCGGCCGTGGTCGACCGGGAAGGCTACGTCATCGCGCACAGCCAGGACGCCAAGCGGTTCGTCGGGCGCCTGGGCCAGCTGGACGCCGTCGCGCGGGTGCAGTCCGCGAACGAAGGCGGGTTCACCTATCGCTCGGTCGATGGCGAACTGCGCGACGTGGCGTTCACCCACGTGGCGCTGTCGGGCTGGGCCGTGGTGATGGGCATCCCGGACGCGACCCTGATGGCGCCCGTCCGCATCTCGACCCTGCAGCTCGCCTGCGGCGGCCTGGCGACCCTCGCCGTCGCCTTGATCCTGGCCGGAGTGGTGGGCCGCCAGGTGTCCCGCCCGCTGCGCGAACTCGCCGAACGGGGGGAGCGGGTCGGGCGCGGCGAGCGCGTCCCGCTCACCCGTACCGGCCTGCGGGAGACGGACTCGCTCGCGCAGGTCCTGCACACCGCCGCGGAACGTCTGGTGCAGCACGCCGGGGAGCGGCAGATGCTGCTGGAGCGGACGGTGCAGGCGCAGCAGGACGAGCGCCGGCGCATCGCGCGGGAGCTGCATGACGGGCTGAGCCAATACCTGACGGCGCTGCGCATCGGGCTCACCGGCCTGGAACGCCGCTGCGAACTGGACGGCGACGCGCCCCGCCGCCTCTCCGCCCTCAAGCAACTCACCGACCAACTCGGCCAGGCGCTCGGACGCATGGCCTGGGAGCTGCGGCCCACGGCGCTGGACGACCTTGGCCTCGAGAAGGCCATCGCCCAATATCTGGAGGAATGGGCGGAGCGTTACGAGGTGCGAATCGACCAGGACATCCACATCGGCCCGGCGCGGCTGCCCCCGGTGGTCGAGACCACGCTGTTCCGGGTGGTGCAGGAAGGCCTGACCAACGTCGTGAAGCACGCGGGGGCCGAACACGTGGCGGTGATCCTGCATGCGGATGCCGCTGAAGTCCGGCTGATCCTGGAAGACAATGGGCGCGGGATGACCCCGCCGGACGTCGCCGCGCCCGGGCGGCAACTCGGCATCGTCGGCATGCGGGAACGCGTGGTCCTGGTCGGCGGCTCCATCGATATCGAATCGCTGCCGAACCAGGGCACCACGATCTACGTCCGCATCCCTCTGGCCGCGGCCGCGCCGGCCGTATCGTCCGCATGA
PROTEIN sequence
Length: 569
VPSIRVLMLGLTFAIVLPLMSFSAYLVMEAAQRAQSLMESELRERARLTAASIDQMLVVVRSRLFAMAASPSLASGDFDAFHDRIADLVRPRSLIVVLTDAAGHTMLSTAVPFGTPLPDFPLQAGFRRVIDSGVPTISGFVPDPITHRPALYMSVLVPTTEHGPCVLSIDVSGVLQDLLEQDRLQDGWAAAVVDREGYVIAHSQDAKRFVGRLGQLDAVARVQSANEGGFTYRSVDGELRDVAFTHVALSGWAVVMGIPDATLMAPVRISTLQLACGGLATLAVALILAGVVGRQVSRPLRELAERGERVGRGERVPLTRTGLRETDSLAQVLHTAAERLVQHAGERQMLLERTVQAQQDERRRIARELHDGLSQYLTALRIGLTGLERRCELDGDAPRRLSALKQLTDQLGQALGRMAWELRPTALDDLGLEKAIAQYLEEWAERYEVRIDQDIHIGPARLPPVVETTLFRVVQEGLTNVVKHAGAEHVAVILHADAAEVRLILEDNGRGMTPPDVAAPGRQLGIVGMRERVVLVGGSIDIESLPNQGTTIYVRIPLAAAAPAVSSA*