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SCNpilot_cont_750_bf_scaffold_116_curated

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_116_curated_1
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423..1424
DNA (1002bp) protein (334aa)
Outer membrane protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX65_9PROT
Outer membrane protein {ECO:0000313|EMBL:EGY02139.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
OmpA/MotB family outer membrane protein
SCNpilot_cont_750_bf_scaffold_116_curated_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1434..2780
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02138.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_750_bf_scaffold_116_curated_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2783..3940
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XX63_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02137.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_750_bf_scaffold_116_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4561..5508)
DNA (948bp) protein (316aa)
Transposase and inactivated derivatives-like protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QG07_RHOPT
Transposase and inactivated derivatives-like protein
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ACE99598.1}; Flags: Precursor;; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_bf_scaffold_116_curated_5
unknown

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comp(7998..11189)
DNA (3192bp) protein (1064aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_116_curated_6
unknown

Not on your lists

11509..12972
DNA (1464bp) protein (488aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_116_curated_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12981..13922
DNA (942bp) protein (314aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Putative serine/threonine protein kinase (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YXM3_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_cont_750_bf_scaffold_116_curated_8
unknown

Not on your lists

14461..14823
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_116_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16411..17406)
DNA (996bp) protein (332aa)
Oligopeptide transport protein (ABC superfamily, ATP-binding protein) {ECO:0000313|EMBL:KFC64987.1}; EC=3.6.3.27 {ECO:0000313|EMBL:KFC64987.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYK5_PARDP
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_116_curated_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17403..18383)
DNA (981bp) protein (327aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F03F
ABC transporter ATP-binding protein oligo/dipeptide transport protein {ECO:0000313|EMBL:KFC64988.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_116_curated_11
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18380..19294)
DNA (915bp) protein (305aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYK7_PARDP
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABL68351.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_cont_750_bf_scaffold_116_curated_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19291..20229)
DNA (939bp) protein (313aa)
glutathione ABC transporter permease n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F041
Glutathione ABC transporter permease {ECO:0000313|EMBL:KGM33409.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_116_curated_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20245..21834)
DNA (1590bp) protein (530aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYK9_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGM33410.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
extracellular solute-binding protein
SCNpilot_cont_750_bf_scaffold_116_curated_14
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21946..22920)
DNA (975bp) protein (325aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYL4_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGD96436.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
mandelate racemase
SCNpilot_cont_750_bf_scaffold_116_curated_15
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23475..24497
DNA (1023bp) protein (341aa)
Sugar-binding domain protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RSH5_9PROT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDN52039.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
lacI; transcriptional regulator
SCNpilot_cont_750_bf_scaffold_116_curated_16
bacterium YEK0313, Bacteria

Not on your lists

comp(24838..26253)
DNA (1416bp) protein (472aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003657E97
Acylamidase {ECO:0000313|EMBL:CEJ10622.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_116_curated_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26414..27049
DNA (636bp) protein (212aa)
Putative uncharacterized protein id=3051785 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein NipSnap homolog 3B-like
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_750_bf_scaffold_116_curated_18
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27153..27704)
DNA (552bp) protein (184aa)
UPI0003CF7D69 related cluster n=1 Tax=unknown RepID=UPI0003CF7D69
Chloramphenicol phosphotransferase {ECO:0000313|EMBL:ESY55652.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_116_curated_19
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27705..28547)
DNA (843bp) protein (281aa)
UPI0003CE992B related cluster n=1 Tax=unknown RepID=UPI0003CE992B
Oxygen-insensitive NADPH nitroreductase {ECO:0000313|EMBL:ETY83230.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
nitroreductase
SCNpilot_cont_750_bf_scaffold_116_curated_20
Gluconobacter morbifer, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28615..29142)
DNA (528bp) protein (176aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1088869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter morbifer G707.;"
inorganic pyrophosphatase n=1 Tax=Gluconobacter frateurii RepID=UPI00029B577C
inorganic pyrophosphatase
SCNpilot_cont_750_bf_scaffold_116_curated_21
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29298..31403)
DNA (2106bp) protein (702aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMQ6_AZOBR
hppA; pyrophosphate-energized proton pump
SCNpilot_cont_750_bf_scaffold_116_curated_22
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31808..33487
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ4_GRABC
putative ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ABI61098.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_116_curated_23
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33504..34010
DNA (507bp) protein (169aa)
Acetyltransferase, GNAT family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ3_GRABC
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ABI61099.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_116_curated_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34119..35003)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LXR2_METRJ
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_750_bf_scaffold_116_curated_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35013..35615)
DNA (603bp) protein (201aa)
Toluene transport system Ttg2D protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVQ0_GRABC
ABC transporter toluene transporter auxiliary component {ECO:0000313|EMBL:GAN76623.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
toluene transport system Ttg2D protein
SCNpilot_cont_750_bf_scaffold_116_curated_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35656..36564)
DNA (909bp) protein (303aa)
VacJ-like protein (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIP9_9PROT
Lipoprotein {ECO:0000313|EMBL:GAN76624.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
lipoprotein; K04754 lipoprotein
SCNpilot_cont_750_bf_scaffold_116_curated_27
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36740..37729
DNA (990bp) protein (330aa)
methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Methylenetetrahydrofolate reductase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVP8_GRABC
SCNpilot_cont_750_bf_scaffold_116_curated_28
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37710..38729)
DNA (1020bp) protein (340aa)
Sodium bile acid symporter family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIQ1_9PROT
Sodium bile acid symporter family protein {ECO:0000313|EMBL:EFH12812.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein; K03453 bile acid:Na+ symporter, BASS family
SCNpilot_cont_750_bf_scaffold_116_curated_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38731..40917
DNA (2187bp) protein (729aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
DNA helicase II (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UvrD/REP helicase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZXP7_9PROT
SCNpilot_cont_750_bf_scaffold_116_curated_30
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40914..41831
DNA (918bp) protein (306aa)
prmA; 50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
ribosomal protein L11 methyltransferase n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237DADA
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:AHI24606.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
Displaying items 1-30 of 171 in total

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