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SCNpilot_cont_750_bf_scaffold_157_curated

Search features with annotation key words

Displaying items 1-30 of 280 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_157_curated_1
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(178..1305)
DNA (1128bp) protein (376aa)
Uncharacterized protein (Fragment) n=1 Tax=Burkholderia sp. TJI49 RepID=F0GC71_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGB93956.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_157_curated_2
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1543..3612
DNA (2070bp) protein (690aa)
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZKY6_METPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB82985.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
SCNpilot_cont_750_bf_scaffold_157_curated_3
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4284..5090
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A8CFC
Uncharacterized protein {ECO:0000313|EMBL:EFH11121.1}; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_157_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5382..6242)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003021200
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:KFC74384.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endonuclease/exonuclease/phosphatase; K06896
SCNpilot_cont_750_bf_scaffold_157_curated_5
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6911..8092
DNA (1182bp) protein (394aa)
Amidohydrolase {ECO:0000313|EMBL:EFH10830.1}; EC=3.5.1.32 {ECO:0000313|EMBL:EFH10830.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035EA004
hydrolase
SCNpilot_cont_750_bf_scaffold_157_curated_6
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8304..8600
DNA (297bp) protein (99aa)
flavin reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI000377E10F
Flavin reductase {ECO:0000313|EMBL:EJU12569.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_157_curated_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8603..10060)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J3P5_POLGS
hypothetical protein; K06919 putative DNA primase/helicase
Uncharacterized protein {ECO:0000313|EMBL:ADZ72181.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_bf_scaffold_157_curated_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10328..10789)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00031A0BA9
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48906.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
MarR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_157_curated_9
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10918..12738
DNA (1821bp) protein (607aa)
Cl-channel voltage-gated family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YG09_MESOW
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AEH88040.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_750_bf_scaffold_157_curated_10
unknown

Not on your lists

12829..13203
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_157_curated_11
unknown

Not on your lists

comp(13355..13624)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_157_curated_12
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14029..14373
DNA (345bp) protein (115aa)
Ferredoxin n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVE0_GRABC
ferredoxin; K05524 ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABI61212.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_157_curated_13
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14409..14756
DNA (348bp) protein (116aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Alkylhydroperoxidase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BCA6_9RHIZ
alkylhydroperoxidase
SCNpilot_cont_750_bf_scaffold_157_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14916..15980
DNA (1065bp) protein (355aa)
NnrS n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQG1_NITHX
protein NnrS
NnrS {ECO:0000313|EMBL:ABE61536.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_157_curated_15
unknown

Not on your lists

comp(16078..16392)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_157_curated_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16433..17116)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI0002D621AA
iron-sulfur cluster repair di-iron protein; K07322 regulator of cell morphogenesis and NO signaling
Iron-sulfur cluster repair di-iron protein {ECO:0000313|EMBL:ADX45534.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_cont_750_bf_scaffold_157_curated_17
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17245..17670
DNA (426bp) protein (142aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQD2_XANP2
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
Predicted transcriptional regulator {ECO:0000313|EMBL:CCG09077.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_cont_750_bf_scaffold_157_curated_18
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17681..18745)
DNA (1065bp) protein (355aa)
Endonuclease DDE n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ER74_9RHIZ
Endonuclease DDE {ECO:0000313|EMBL:KFD25583.1}; Flags: Fragment;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
insertion sequence IS630 uncharacterized 39 kDa protein ISO-IS200 39 kDa protein
SCNpilot_cont_750_bf_scaffold_157_curated_19
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19019..20173
DNA (1155bp) protein (385aa)
NnrS family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BY40_NITHN
NnrS family protein
NnrS family protein {ECO:0000313|EMBL:ADE15951.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
SCNpilot_cont_750_bf_scaffold_157_curated_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20188..21276
DNA (1089bp) protein (363aa)
Thiamine biosynthesis protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ICQ2_BORPD
ApbE family protein 2 {ECO:0000313|EMBL:CDX16346.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
nosX; thiamine biosynthesis protein; K03734 thiamine biosynthesis lipoprotein
SCNpilot_cont_750_bf_scaffold_157_curated_21
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21324..21704
DNA (381bp) protein (127aa)
Sulfite dehydrogenase (Cytochrome) subunit SorB n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WIA2_VEREI
Uncharacterized protein {ECO:0000313|EMBL:KJC56659.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
class I cytochrome c; K08738 cytochrome c
SCNpilot_cont_750_bf_scaffold_157_curated_22
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21734..22639)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EP49_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ37943.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_157_curated_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22729..24939
DNA (2211bp) protein (737aa)
Nitric oxide reductase transcription regulator n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y3N1_9PROT
FMN-binding protein {ECO:0000313|EMBL:KJB93155.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
FMN-binding domain-containing protein
SCNpilot_cont_750_bf_scaffold_157_curated_24
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25026..26996
DNA (1971bp) protein (657aa)
Nitrous-oxide reductase {ECO:0000256|HAMAP-Rule:MF_00716}; EC=1.7.2.4 {ECO:0000256|HAMAP-Rule:MF_00716};; N(2)OR {ECO:0000256|HAMAP-Rule:MF_00716}; N2O reductase {ECO:0000256|HAMAP-Rule:MF_00716}; Flags: Precursor;; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
nosZ; nitrous-oxide reductase (EC:1.7.2.4); K00376 nitrous-oxide reductase [EC:1.7.2.4]
Nitrous-oxide reductase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ICP1_BORPD
SCNpilot_cont_750_bf_scaffold_157_curated_25
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26993..28291
DNA (1299bp) protein (433aa)
nosD; copper ABC transporter periplasmic copper-binding protein (EC:1.7.2.4); K07218 nitrous oxidase accessory protein
Copper ABC transporter, periplasmic copper-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ICP3_BORPD
Copper-binding periplasmic protein {ECO:0000313|EMBL:CDX16335.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_cont_750_bf_scaffold_157_curated_26
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28288..29211
DNA (924bp) protein (308aa)
Copper ABC transporter, ATP-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ICP6_BORPD
nosF; copper ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
Copper ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CAP44692.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_750_bf_scaffold_157_curated_27
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29208..30038
DNA (831bp) protein (277aa)
Copper ABC transporter permease protein NosY n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZF35_9BRAD
nosY; copper ABC transporter permease protein NosY
Copper ABC transporter permease protein NosY {ECO:0000313|EMBL:BAM92462.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_750_bf_scaffold_157_curated_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30035..30553
DNA (519bp) protein (173aa)
NosL family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LZ8_RHOP5
NosL family protein
NosL family protein {ECO:0000313|EMBL:ABJ07036.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_750_bf_scaffold_157_curated_29
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30561..31370)
DNA (810bp) protein (270aa)
ribonucleoside-triphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGT0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH13491.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_750_bf_scaffold_157_curated_30
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31399..31962
DNA (564bp) protein (188aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0W4_ACIMA
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 280 in total

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