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SCNpilot_cont_750_bf_scaffold_219_curated

Search features with annotation key words

Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_219_curated_1
unknown

Not on your lists

comp(3..275)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_219_curated_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(290..1144)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003035357
UspA {ECO:0000313|EMBL:GAK46514.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
UspA domain-containing protein
SCNpilot_cont_750_bf_scaffold_219_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1159..2640)
DNA (1482bp) protein (494aa)
Sulfate transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPV6_9RHIZ
Sulfate transporter {ECO:0000313|EMBL:EHK57223.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sulfate transporter
SCNpilot_cont_750_bf_scaffold_219_curated_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..3766)
DNA (267bp) protein (89aa)
Integrase, catalytic region n=1 Tax=alpha proteobacterium BAL199 RepID=A8U458_9PROT
Integrase, catalytic region {ECO:0000313|EMBL:EDP61099.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
integrase catalytic subunit; K07497 putative transposase
SCNpilot_cont_750_bf_scaffold_219_curated_5
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4119..5078
DNA (960bp) protein (320aa)
hypothetical protein; K01754 threonine dehydratase [EC:4.3.1.19]
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Pseudomonas putida (strain W619) RepID=B1J8I4_PSEPW
Uncharacterized protein {ECO:0000313|EMBL:KIF77984.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
SCNpilot_cont_750_bf_scaffold_219_curated_6
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5308..6471)
DNA (1164bp) protein (388aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0N9_STAND
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADH91360.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_219_curated_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6487..7170)
DNA (684bp) protein (228aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0P0_STAND
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADH91361.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_219_curated_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7192..8055)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036BB2EE
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADH91362.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_219_curated_9
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8222..9253)
DNA (1032bp) protein (344aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PSA9_RHOS1
oligopeptide/dipeptide ABC transporter, ATPase subunit; K02032 peptide/nickel transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABN79225.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_cont_750_bf_scaffold_219_curated_10
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9250..10179)
DNA (930bp) protein (310aa)
ABC di/oligopeptide transporter, ATPase subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N376_9RHIZ
ABC di/oligopeptide transporter, ATPase subunit {ECO:0000313|EMBL:EKF18633.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC di/oligopeptide transporter, ATPase subunit; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_219_curated_11
unknown

Not on your lists

comp(11229..11423)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_219_curated_12
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11567..13129
DNA (1563bp) protein (521aa)
Extracellular solute-binding protein, family 5 n=2 Tax=Rhodobacter sphaeroides RepID=A3PS99_RHOS1
extracellular solute-binding protein
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:ABN79215.1}; Flags: Precursor;; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_cont_750_bf_scaffold_219_curated_13
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13153..14100
DNA (948bp) protein (316aa)
ABC di/oligopeptide transporter, inner membrane subunit n=1 Tax=Rhodobacter sphaeroides WS8N RepID=F3U4E3_RHOSH
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:EKX56771.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
ABC di/oligopeptide transporter, inner membrane subunit
SCNpilot_cont_750_bf_scaffold_219_curated_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14090..15007
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MN32_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKF18642.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_219_curated_15
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15217..15906
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=1 Tax=Pantoea sp. AS-PWVM4 RepID=U2MJZ1_9ENTR
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB85178.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_219_curated_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16024..17064
DNA (1041bp) protein (347aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MN31_9RHIZ
Peptidase M14 {ECO:0000313|EMBL:KKB85177.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
succinylglutamatedesuccinylase/aspartoacylase; K06987
SCNpilot_cont_750_bf_scaffold_219_curated_17
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17115..18629
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M973_9RHIZ
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
MlrC domain-containing protein
SCNpilot_cont_750_bf_scaffold_219_curated_18
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18626..19798
DNA (1173bp) protein (391aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0P2_STAND
Mandelate racemase {ECO:0000313|EMBL:KKB85172.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
mandelate racemase/muconate lactonizing protein
SCNpilot_cont_750_bf_scaffold_219_curated_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20530..21324
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361CA6D
IclR family transcriptional regulator {ECO:0000313|EMBL:EKF18507.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
IclR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_219_curated_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21329..22843
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C7FE5
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
MlrC domain-containing protein
SCNpilot_cont_750_bf_scaffold_219_curated_21
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22848..24173
DNA (1326bp) protein (442aa)
class III aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde aminotransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z173_9RHIZ
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:EIM29965.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_750_bf_scaffold_219_curated_22
unknown

Not on your lists

comp(24170..24304)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_219_curated_23
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24629..25249
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J6B8_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ80374.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_bf_scaffold_219_curated_24
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25340..26176)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003774BBE
Uncharacterized protein {ECO:0000313|EMBL:KJB94428.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Phytanoyl-CoA dioxygenase
SCNpilot_cont_750_bf_scaffold_219_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26197..27144)
DNA (948bp) protein (316aa)
peptide ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI00035FE410
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EKF18508.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_219_curated_26
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27141..27986)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035EB0B6
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EKF18509.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_219_curated_27
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27986..29995)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035FD585
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EKF18510.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein, C-terminal; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_219_curated_28
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30013..31578)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F500B
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIM29959.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC-type dipeptide transport system, periplasmic component
SCNpilot_cont_750_bf_scaffold_219_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31731..33206
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003696B80
Uncharacterized protein {ECO:0000313|EMBL:KFC71660.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
microcystin LR degradation protein MlrC-like protein
SCNpilot_cont_750_bf_scaffold_219_curated_30
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33247..33465
DNA (219bp) protein (73aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EGP46354.1}; EC=1.1.1.69 {ECO:0000313|EMBL:EGP46354.1};; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
gluconate 5-dehydrogenase (EC:1.1.1.69)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A9BFC
Displaying items 1-30 of 206 in total

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