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SCNpilot_cont_750_bf_scaffold_422_curated

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_422_curated_1
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IGL8_METNO
major facilitator superfamily protein; K08369 MFS transporter, putative metabolite:H+ symporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL55918.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_422_curated_2
unknown

Not on your lists

comp(252..1598)
DNA (1347bp) protein (449aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_422_curated_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1604..2488)
DNA (885bp) protein (295aa)
Putative carboxy-phosphonoenolpyruvate mutase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U323_9PROT
Putative carboxy-phosphonoenolpyruvate mutase {ECO:0000313|EMBL:EDP61457.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
putative isocitrate lyase-family protein,putative carboxyvinyl-carboxyphosphonate phosphorylmutase
SCNpilot_cont_750_bf_scaffold_422_curated_4
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2713..3414
DNA (702bp) protein (234aa)
GntR domain protein n=2 Tax=Micromonospora RepID=D9T044_MICAI
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ADL47280.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
SCNpilot_cont_750_bf_scaffold_422_curated_5
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3837..4160)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQA6_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA17234.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_422_curated_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4157..4603)
DNA (447bp) protein (149aa)
Transposase, IS4 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNY4_9PROT
Transposase, IS4 {ECO:0000313|EMBL:EDP65506.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
transposase
SCNpilot_cont_750_bf_scaffold_422_curated_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4893..5585
DNA (693bp) protein (231aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036659DA
Uncharacterized protein {ECO:0000313|EMBL:EWY40768.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_750_bf_scaffold_422_curated_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5700..6560)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQE0_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29700.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
resolvase
SCNpilot_cont_750_bf_scaffold_422_curated_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6789..8297
DNA (1509bp) protein (503aa)
Dipeptide ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JK48_AGRRK
dipeptide ABC transporter; K02035 peptide/nickel transport system substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAJ93286.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_750_bf_scaffold_422_curated_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8309..9286)
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JV07_9RHIZ
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:CDN58054.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_422_curated_11
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9283..10233)
DNA (951bp) protein (317aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J2IMS4_9RHIZ
Oligopeptide ABC transporter, ATP-binding protein AppD {ECO:0000313|EMBL:CDN51876.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
oligopeptide ABC transporter; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_422_curated_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10242..11078)
DNA (837bp) protein (279aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J3BES1_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:KGD96466.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
dppCch1; dipeptide ABC transporter; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_422_curated_13
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11075..11995)
DNA (921bp) protein (307aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J2I2D8_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:AJY45060.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
peptide ABC transporter; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_422_curated_14
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12027..13529)
DNA (1503bp) protein (501aa)
Dipeptide ABC transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JK48_AGRRK
Peptide ABC transporter {ECO:0000313|EMBL:AJY47915.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
dipeptide ABC transporter; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_422_curated_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13715..13942
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D0Y7_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU72672.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_422_curated_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14100..17009)
DNA (2910bp) protein (970aa)
Uncharacterized protein-like protein n=2 Tax=Acidiphilium RepID=A5G0B4_ACICJ
hypothetical protein
Uncharacterized protein-like protein {ECO:0000313|EMBL:ABQ31296.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_750_bf_scaffold_422_curated_17
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17009..22702)
DNA (5694bp) protein (1898aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J1E6_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81689.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_750_bf_scaffold_422_curated_18
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22827..24335)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XSX2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99719.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_422_curated_19
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25316..26215)
DNA (900bp) protein (300aa)
Transcriptional regulator, LysR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1FYE0_9BURK
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EDT10781.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_422_curated_20
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26311..27015
DNA (705bp) protein (235aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase {ECO:0000313|EMBL:CDY74861.1}; EC=4.1.2.- {ECO:0000313|EMBL:CDY74861.1};; Uncharacterized protein {ECO:0000313|EMBL:KDR40695.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
putative aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
HpcH/HpaI aldolase n=1 Tax=Burkholderia graminis C4D1M RepID=B1FYD7_9BURK
SCNpilot_cont_750_bf_scaffold_422_curated_21
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27084..28049
DNA (966bp) protein (322aa)
D-3-phosphoglycerate dehydrogenase SerA {ECO:0000313|EMBL:KDM67314.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KDM67314.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=Acidiphilium sp. PM RepID=F7S1Q1_9PROT
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase protein
SCNpilot_cont_750_bf_scaffold_422_curated_22
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28049..28816
DNA (768bp) protein (256aa)
Hydratase/decarboxylase n=1 Tax=Burkholderia graminis C4D1M RepID=B1FYD3_9BURK
Hydratase/decarboxylase {ECO:0000313|EMBL:EDT10774.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hydratase/decarboxylase family protein
SCNpilot_cont_750_bf_scaffold_422_curated_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28908..30761
DNA (1854bp) protein (618aa)
ABC transporter permease n=1 Tax=Bordetella sp. FB-8 RepID=UPI000361C56D
ABC transporter permease {ECO:0000313|EMBL:KJB93146.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
dctM; TRAP dicarboxylate transporter subunit DctM
SCNpilot_cont_750_bf_scaffold_422_curated_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30816..31826
DNA (1011bp) protein (337aa)
TRAP dicarboxylate transporter, periplasmic ligand binding subunit DctP n=2 Tax=Burkholderia RepID=Q13K80_BURXL
Putative TRAP-type C4-dicarboxylate transport system, periplasmic component, DctP-like protein {ECO:0000313|EMBL:KFC63611.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TRAP dicarboxylate transporter, periplasmic ligand binding subunit DctP
SCNpilot_cont_750_bf_scaffold_422_curated_25
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31917..32804
DNA (888bp) protein (296aa)
Alpha/beta hydrolase fold n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKA2_XANP2
Alpha/beta hydrolase {ECO:0000313|EMBL:ETR75785.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_750_bf_scaffold_422_curated_26
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32874..33041)
DNA (168bp) protein (56aa)
4-oxalocrotonate tautomerase family enzyme n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZU05_9PROT
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:KKC34617.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_cont_750_bf_scaffold_422_curated_27
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33733..33912)
DNA (180bp) protein (60aa)
DNA gyrase inhibitor YacG n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M4N9_METRJ
hypothetical protein; K09862 hypothetical protein
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_750_bf_scaffold_422_curated_28
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33905..35020)
DNA (1116bp) protein (372aa)
Putative ribonuclease n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZE11_GLUDA
putative ribonuclease
Putative ribonuclease {ECO:0000313|EMBL:ACI51895.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_422_curated_29
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35017..35610)
DNA (594bp) protein (198aa)
Maf-like protein GbCGDNIH1_1029 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Y1029_GRABC
Maf-like protein GbCGDNIH3_1029 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
septum formation protein Maf; K06287 septum formation protein
SCNpilot_cont_750_bf_scaffold_422_curated_30
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35625..35843)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=IF1_GRABC
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Displaying items 1-30 of 99 in total

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