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SCNpilot_cont_750_bf_scaffold_241_curated

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Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_241_curated_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225..1202)
DNA (978bp) protein (326aa)
polysaccharide biosynthesis protein; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Polysaccharide biosynthesis protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J380_ACIMA
UDP-N-acetylglucosamine 4-epimerase {ECO:0000313|EMBL:GAN76057.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_241_curated_2
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1294..2079)
DNA (786bp) protein (262aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=2 Tax=Acidiphilium RepID=F0J382_ACIMA
Oxidoreductase/SDR, 3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:GAN80350.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
SCNpilot_cont_750_bf_scaffold_241_curated_3
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2179..2754)
DNA (576bp) protein (192aa)
Cysteine dioxygenase type I n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQA6_METSB
cysteine dioxygenase type I
Cysteine dioxygenase type I {ECO:0000313|EMBL:ACK51596.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_750_bf_scaffold_241_curated_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2912..4543
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4L0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL98150.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
MFS family transporter
SCNpilot_cont_750_bf_scaffold_241_curated_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4607..5080
DNA (474bp) protein (158aa)
DNA starvation/stationary phase protection protein Dps n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN54_9RHIZ
DNA starvation/stationary phase protection protein Dps {ECO:0000313|EMBL:EHK57848.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ferritin; K04047 starvation-inducible DNA-binding protein
SCNpilot_cont_750_bf_scaffold_241_curated_6
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5149..7131
DNA (1983bp) protein (661aa)
DNA topoisomerase IV subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
DNA topoisomerase 4 subunit B n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZE47_GLUDA
SCNpilot_cont_750_bf_scaffold_241_curated_7
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7331..7600)
DNA (270bp) protein (90aa)
DNA-binding protein HU n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUC1_GRABC
DNA-binding protein HU; K03530 DNA-binding protein HU-beta
DNA-binding protein HU {ECO:0000313|EMBL:AHJ62468.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_cont_750_bf_scaffold_241_curated_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7820..8740
DNA (921bp) protein (307aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
Putative sugar phosphate isomerase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM28_9RHIZ
N-acetylmuramic acid-6-phosphate etherase {ECO:0000313|EMBL:AJP72435.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCNpilot_cont_750_bf_scaffold_241_curated_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8737..9864
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000372C7A9
SCNpilot_cont_750_bf_scaffold_241_curated_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10005..11438)
DNA (1434bp) protein (478aa)
hypothetical protein; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JM76_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE71599.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_750_bf_scaffold_241_curated_11
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11519..12736)
DNA (1218bp) protein (406aa)
allantoate amidohydrolase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87]
Putative N-carbamoyl-L-amino acid hydrolase(L-carbamoylase) {ECO:0000313|EMBL:CAL74928.1}; EC=3.5.1.87 {ECO:0000313|EMBL:CAL74928.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Putative N-carbamoyl-L-amino acid hydrolase(L-carbamoylase) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YM02_BRASO
SCNpilot_cont_750_bf_scaffold_241_curated_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12747..14258)
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003717EBB
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM32428.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_241_curated_13
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14408..14866
DNA (459bp) protein (153aa)
UPF0178 protein HMPREF9946_03769 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4M0_9PROT
UPF0178 protein HMPREF9946_03769 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein; K09768 hypothetical protein
SCNpilot_cont_750_bf_scaffold_241_curated_14
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15004..15969)
DNA (966bp) protein (322aa)
cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000313|EMBL:ABI61804.1}; EC=2.5.1.47 {ECO:0000313|EMBL:ABI61804.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Cysteine synthase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTP8_GRABC
SCNpilot_cont_750_bf_scaffold_241_curated_15
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16058..16522
DNA (465bp) protein (155aa)
Rrf2 family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTP7_GRABC
Rrf2 family protein {ECO:0000313|EMBL:AHJ62734.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
rrf2 family protein
SCNpilot_cont_750_bf_scaffold_241_curated_16
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16543..17184
DNA (642bp) protein (214aa)
peroxiredoxin (EC:1.11.1.15)
Peroxidase n=1 Tax=Acidiphilium sp. PM RepID=F7SAI9_9PROT
Peroxidase {ECO:0000313|EMBL:EGO93809.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCNpilot_cont_750_bf_scaffold_241_curated_17
unknown

Not on your lists

comp(17259..17483)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_241_curated_18
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17722..18744
DNA (1023bp) protein (341aa)
Phosphate-binding protein PstS n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTP4_GRABC
phosphate-binding protein; K02040 phosphate transport system substrate-binding protein
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_241_curated_19
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18848..19843
DNA (996bp) protein (332aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQK0_9PROT
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EFH10423.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
phosphate transport system permease pstC; K02037 phosphate transport system permease protein
SCNpilot_cont_750_bf_scaffold_241_curated_20
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19840..20736
DNA (897bp) protein (299aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQJ9_9PROT
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EFH10422.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
phosphate transport system permease pstA; K02038 phosphate transport system permease protein
SCNpilot_cont_750_bf_scaffold_241_curated_21
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20751..21566
DNA (816bp) protein (272aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
pstB; phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27]
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQJ8_9PROT
SCNpilot_cont_750_bf_scaffold_241_curated_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21579..22295
DNA (717bp) protein (239aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTP0_GRABC
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
phosphate transport system protein phoU
SCNpilot_cont_750_bf_scaffold_241_curated_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22306..23064
DNA (759bp) protein (253aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQJ6_9PROT
Two component transcriptional regulator PhoB {ECO:0000313|EMBL:GAN76860.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
phosphate regulon transcriptional regulatory protein phoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB
SCNpilot_cont_750_bf_scaffold_241_curated_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..23751
DNA (672bp) protein (224aa)
Metallo-beta-lactamase domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZR3_9PROT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EHM01311.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hydrolase
SCNpilot_cont_750_bf_scaffold_241_curated_25
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23778..25040
DNA (1263bp) protein (421aa)
Glutamine synthetase type I {ECO:0000313|EMBL:BAQ18787.1}; EC=6.3.1.2 {ECO:0000313|EMBL:BAQ18787.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2]
glutamine synthetase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B419DC
SCNpilot_cont_750_bf_scaffold_241_curated_26
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25030..25659)
DNA (630bp) protein (210aa)
Putative amidase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TM29_9PROT
Isochorismatase {ECO:0000313|EMBL:KFB10860.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
isochorismatase hydrolase
SCNpilot_cont_750_bf_scaffold_241_curated_27
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25705..26352
DNA (648bp) protein (216aa)
Isochorismatase family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEU8_9RHOB
isochorismatase
Tax=BJP_IG2158_Rhodobacterales_69_12
SCNpilot_cont_750_bf_scaffold_241_curated_28
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26472..28487
DNA (2016bp) protein (672aa)
Tetratricopeptide TPR_4 n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QNI6_METTR
family 2 glycosyl transferase
Tax=GWF1_Xanthomonadales_69_6_curated
SCNpilot_cont_750_bf_scaffold_241_curated_29
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28497..29702)
DNA (1206bp) protein (402aa)
Peptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGY7_PHEZH
Peptidase M20 {ECO:0000313|EMBL:KFC69316.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
peptidase
SCNpilot_cont_750_bf_scaffold_241_curated_30
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29797..30564)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BTB0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM80769.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 128 in total

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