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SCNpilot_cont_750_bf_scaffold_96_curated

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Displaying items 1-30 of 310 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_96_curated_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

462..1649
DNA (1188bp) protein (396aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZEW8_9PROT
3-ketoacyl-CoA thiolase Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KIM00439.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
SCNpilot_cont_750_bf_scaffold_96_curated_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1693..2763
DNA (1071bp) protein (357aa)
Secretion protein HlyD family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WZY5_OCHA4
Putative HlyD-family secretion protein, yhiI-like protein {ECO:0000313|EMBL:CDX23872.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
secretion protein HlyD family protein; K01993 HlyD family secretion protein
SCNpilot_cont_750_bf_scaffold_96_curated_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2760..5501
DNA (2742bp) protein (914aa)
ABC transporter permease ATP-binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMK8_TISMK
yhiH; ABC transporter permease ATP-binding protein
ABC transporter permease ATP-binding protein {ECO:0000313|EMBL:AFK53996.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_96_curated_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5503..6615
DNA (1113bp) protein (371aa)
ABC-2 type transporter n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMK7_TISMK
yhhJ; ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:AFK53995.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_96_curated_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6988..8139)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Methylobacterium RepID=B1Z8G8_METPB
Uncharacterized protein {ECO:0000313|EMBL:KGM33360.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_96_curated_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8436..9866
DNA (1431bp) protein (477aa)
Betaine aldehyde dehydrogenase, NAD-dependent n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4X0_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGM35209.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_96_curated_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9892..10104
DNA (213bp) protein (71aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
betaine-aldehyde dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D54218
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49290.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_750_bf_scaffold_96_curated_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10509..11072
DNA (564bp) protein (188aa)
betaine-aldehyde dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D54218
Aldehyde dehydrogenase (NAD+) {ECO:0000313|EMBL:ERF82410.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
aldehyde dehydrogenase
SCNpilot_cont_750_bf_scaffold_96_curated_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11100..11609)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NX68_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42479.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_96_curated_10
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11637..11918
DNA (282bp) protein (94aa)
hypothetical protein, partial n=1 Tax=Elioraea tepidiphila RepID=UPI0003691F40
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS17174.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_750_bf_scaffold_96_curated_11
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11915..15157)
DNA (3243bp) protein (1081aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7]
Error-prone DNA polymerase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IL04_XANP2
SCNpilot_cont_750_bf_scaffold_96_curated_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15154..16569)
DNA (1416bp) protein (472aa)
nucleotidyltransferase n=1 Tax=Xanthobacteraceae RepID=UPI0003676345
nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein; K14161 protein ImuB
Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein {ECO:0000313|EMBL:ADH91663.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_750_bf_scaffold_96_curated_13
bacterium YEK0313, Bacteria

Not on your lists

comp(16577..17407)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EF7766
hypothetical protein; K14160 protein ImuA
Uncharacterized protein {ECO:0000313|EMBL:CEJ14051.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_96_curated_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17542..18423)
DNA (882bp) protein (294aa)
Phosphonate ABC transporter, inner membrane subunit n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QDL0_RHOPT
phosphonate ABC transporter inner membrane subunit; K02042 phosphonate transport system permease protein
Phosphonate ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACE99323.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_bf_scaffold_96_curated_15
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19301)
DNA (882bp) protein (294aa)
Phosphonate uptake transporter n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISN1_RHOP2
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KJC60675.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
phosphonate ABC transporter inner membrane protein; K02042 phosphonate transport system permease protein
SCNpilot_cont_750_bf_scaffold_96_curated_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19381..20313)
DNA (933bp) protein (311aa)
Putative PhnD protein, phosphonate ABC transporter, exported protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TY28_9BRAD
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC46620.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
phosphonates-binding periplasmic protein; K02044 phosphonate transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_96_curated_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20369..21187)
DNA (819bp) protein (273aa)
phoC; phosphonates transport system nucleotide binding/ATPase; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28] rbh
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Phosphonates import ATP-binding protein PhnC n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=PHNC_BRADU rbh
SCNpilot_cont_750_bf_scaffold_96_curated_18
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21290..22255)
DNA (966bp) protein (322aa)
Carboxylesterase Est2 family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4E3_9PROT
Carboxylesterase Est2 family protein {ECO:0000313|EMBL:EHL98168.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative acetyl esterase
SCNpilot_cont_750_bf_scaffold_96_curated_19
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22377..24794
DNA (2418bp) protein (806aa)
Acetyltransferase, GNAT family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PCY2_9BURK
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ELX09510.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
putative acetyltransferase; K09181 hypothetical protein
SCNpilot_cont_750_bf_scaffold_96_curated_20
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24791..25501
DNA (711bp) protein (237aa)
tena; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
Tena n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INB8_RHOCS
Tena {ECO:0000313|EMBL:ACI99015.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_750_bf_scaffold_96_curated_21
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25501..26274
DNA (774bp) protein (258aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVG2_GRABC
fumarylacetoacetate hydrolase family protein
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:ABI61190.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_96_curated_22
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26287..27021)
DNA (735bp) protein (245aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3); K02419 flagellar biosynthetic protein FliP
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362741B
Flagellar biosynthesis protein FliP {ECO:0000313|EMBL:GAN78260.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_96_curated_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27018..27320)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E190BD
Uncharacterized protein {ECO:0000313|EMBL:GAN78261.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_96_curated_24
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27366..27647)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQI1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78262.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_96_curated_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27818..28201
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F7C78
Flagellar basal-body rod protein FlgB {ECO:0000313|EMBL:GAN78263.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellar basal-body rod protein FlgB; K02387 flagellar basal-body rod protein FlgB
SCNpilot_cont_750_bf_scaffold_96_curated_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28228..28635
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036EED44
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flgC; flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC
SCNpilot_cont_750_bf_scaffold_96_curated_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28640..28945
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036202E7
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellar hook-basal body protein FleE; K02408 flagellar hook-basal body complex protein FliE
SCNpilot_cont_750_bf_scaffold_96_curated_28
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29000..29272
DNA (273bp) protein (91aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FQS9_GLUOX
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:GAN55793.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_cont_750_bf_scaffold_96_curated_29
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29269..30057
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037ED473
Flagellar biosynthetic protein FliR {ECO:0000313|EMBL:GAN55794.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR
SCNpilot_cont_750_bf_scaffold_96_curated_30
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30061..31116
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036FBBFE
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:GAN55795.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB
Displaying items 1-30 of 310 in total

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