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SCNpilot_cont_750_bf_scaffold_181_curated

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Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_181_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..173
DNA (171bp) protein (57aa)
Transposase (Class IV) n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2B8_9BRAD
Transposase (Class IV) {ECO:0000313|EMBL:EAQ33621.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_181_curated_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277..1290)
DNA (1014bp) protein (338aa)
NADP-dependent oxidoreductase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FACF1D
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EHL98635.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
aldo/keto reductase
SCNpilot_cont_750_bf_scaffold_181_curated_3
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..1998
DNA (645bp) protein (215aa)
Chromate transport protein ChrA n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXR8_9RHIZ
Chromate transport protein ChrA {ECO:0000313|EMBL:EIM28760.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
chromate transport protein ChrA
SCNpilot_cont_750_bf_scaffold_181_curated_4
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1995..2519
DNA (525bp) protein (175aa)
Putative chromate transporter n=6 Tax=Bordetella bronchiseptica RepID=K0MT78_BORBM
chromate transporter
Chromate transport protein {ECO:0000313|EMBL:KDD62571.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_750_bf_scaffold_181_curated_5
unknown

Not on your lists

2744..3424
DNA (681bp) protein (227aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_181_curated_6
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3548..9235
DNA (5688bp) protein (1896aa)
Putative collagen-binding protein (Fragment) n=1 Tax=Beggiatoa alba B18LD RepID=I3CHM2_9GAMM
Colossin-A {ECO:0000313|EMBL:CCH02373.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
Cna B domain-containing protein
SCNpilot_cont_750_bf_scaffold_181_curated_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9376..10359
DNA (984bp) protein (328aa)
Extracellular solute-binding protein family 1 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAW8_VARPE
family 1 extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_cont_750_bf_scaffold_181_curated_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10397..12082
DNA (1686bp) protein (562aa)
ABC transporter, permease protein id=4306926 bin=GWF2_Methylomirabilis_70_14 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_750_bf_scaffold_181_curated_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12079..13161
DNA (1083bp) protein (361aa)
ABC transporter; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
ABC transporter, ATP-binding protein id=4689025 bin=GWC2_Methylomirabilis_70_24 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
SCNpilot_cont_750_bf_scaffold_181_curated_10
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13166..14281
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037698A5
Aminotransferase, class V {ECO:0000313|EMBL:KCB41225.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
putative cysteine desulfurase/selenocysteine lyase
SCNpilot_cont_750_bf_scaffold_181_curated_11
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14490..15302)
DNA (813bp) protein (271aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IG31_METNO
metallophosphoesterase
SCNpilot_cont_750_bf_scaffold_181_curated_12
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15623..16402
DNA (780bp) protein (260aa)
Response regulator receiver domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8B1_9CAUL
Response regulator receiver domain protein {ECO:0000313|EMBL:EDX81711.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
transcriptional regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_cont_750_bf_scaffold_181_curated_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16965..18155)
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HM30_GLUDA
SCNpilot_cont_750_bf_scaffold_181_curated_14
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18158..19174)
DNA (1017bp) protein (339aa)
glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Glyceraldehyde 3-phosphate dehydrogenase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVE3_GRABC
SCNpilot_cont_750_bf_scaffold_181_curated_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19242..21281)
DNA (2040bp) protein (680aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
tkt; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Transketolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6A5_9PROT
SCNpilot_cont_750_bf_scaffold_181_curated_16
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21369..22139)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHE1_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA19367.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_181_curated_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22269..23378
DNA (1110bp) protein (370aa)
Putative leucine-specific-binding protein LivK n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A122_9PROT
Putative leucine-specific-binding protein LivK {ECO:0000313|EMBL:EHM00685.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
livK; branched-chain amino acid transport system substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_181_curated_18
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23523..24038)
DNA (516bp) protein (172aa)
FMN reductase (EC:1.5.1.29); K09024 flavin reductase [EC:1.5.1.-]
FMN reductase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BV73_GRABC
Flavin mononucleotide (FMN) reductase {ECO:0000313|EMBL:GAN76561.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_181_curated_19
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24061..25074
DNA (1014bp) protein (338aa)
Aminotransferase, class IV n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TWW1_TISMK
ilvE; aminotransferase, class IV
Aminotransferase, class IV {ECO:0000313|EMBL:AFK57249.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_181_curated_20
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25107..25298
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H2D3_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP54138.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_181_curated_21
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25295..26767
DNA (1473bp) protein (491aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Putative glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H2D6_GLUDA
Putative glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CAP54139.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_750_bf_scaffold_181_curated_22
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26886..27422)
DNA (537bp) protein (179aa)
Transcription elongation factor GreB n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUA1_RHOCS
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_750_bf_scaffold_181_curated_23
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27505..29352
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DF60A
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM31489.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_750_bf_scaffold_181_curated_24
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29490..30305)
DNA (816bp) protein (272aa)
enoyl-CoA hydratase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000377A191
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKH20022.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
enoyl-CoA hydratase/isomerase
SCNpilot_cont_750_bf_scaffold_181_curated_25
unknown

Not on your lists

comp(30271..31185)
DNA (915bp) protein (305aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_181_curated_26
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31296..32627)
DNA (1332bp) protein (444aa)
Aminotransferase, class III {ECO:0000313|EMBL:EFH12111.1}; EC=2.6.1.62 {ECO:0000313|EMBL:EFH12111.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein; K00837 [EC:2.6.1.-] rbh
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000362F77C
SCNpilot_cont_750_bf_scaffold_181_curated_27
Komagataeibacter europaeus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32792..33130
DNA (339bp) protein (113aa)
ATP synthase I chain (EC:3.6.3.14); K02116 ATP synthase protein I
ATP synthase I n=2 Tax=Gluconacetobacter europaeus RepID=UPI0002E9EEDB
ATP synthase F0 subunit iota {ECO:0000313|EMBL:GAN95660.1}; TaxID=1234669 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter europaeus NBRC 3261.;"
SCNpilot_cont_750_bf_scaffold_181_curated_28
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33185..33976
DNA (792bp) protein (264aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=ATP6_GRABC rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCNpilot_cont_750_bf_scaffold_181_curated_29
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34044..34268
DNA (225bp) protein (75aa)
ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
ATP synthase subunit c n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=ATPL_GRABC
ATP synthase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; ATP synthase F(0) sector subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; F-type ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; Short=F-ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396};; Lipid-binding protein {ECO:0000255|HAMAP-Rule:MF_01396}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_181_curated_30
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34286..34873
DNA (588bp) protein (196aa)
ATP synthase subunit B' (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14]
ATP synthase subunit b n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YT54_9PROT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Displaying items 1-30 of 114 in total

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