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SCNpilot_cont_750_bf_scaffold_1220_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1220_curated_1
RLO_PLX_64_10, Bacteria

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comp(1..654)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZV08_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_750_bf_scaffold_1220_curated_2
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(654..2930)
DNA (2277bp) protein (759aa)
heavy metal translocating P-type ATPase (EC:3.6.3.3); K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
ATPase n=1 Tax=Elioraea tepidiphila RepID=UPI000376D93A
ATPase {ECO:0000313|EMBL:KIJ72530.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
SCNpilot_cont_750_bf_scaffold_1220_curated_3
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3064..3537
DNA (474bp) protein (158aa)
Transcriptional regulator, MerR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K393_9RHOB
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:KCV80768.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;"
zntR; MerR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1220_curated_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3930..7100)
DNA (3171bp) protein (1057aa)
Putative type I restriction enzyme hindVIIP R protein {ECO:0000313|EMBL:KDM67729.1}; EC=3.1.21.3 {ECO:0000313|EMBL:KDM67729.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
DEAD/DEAH box helicase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B3CD38
SCNpilot_cont_750_bf_scaffold_1220_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7097..8125)
DNA (1029bp) protein (343aa)
Putative DNA-binding protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N5L6_RHOPA
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KIZ43708.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
DNA-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1220_curated_6
RLO_RIF02_62_27, RIF2, Bacteria

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comp(8122..8469)
DNA (348bp) protein (116aa)
type I DNA specificity S subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg3 RepID=UPI00036FFB4B
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
SCNpilot_cont_750_bf_scaffold_1220_curated_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9440..11056)
DNA (1617bp) protein (539aa)
Putative type I restriction enzyme hindVIIP M protein {ECO:0000313|EMBL:KDM67731.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KDM67731.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hsdM; type I restriction enzyme M protein; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
DNA methyltransferase n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B392F7
SCNpilot_cont_750_bf_scaffold_1220_curated_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11059..11499)
DNA (441bp) protein (147aa)
Transcriptional regulator, MerR family protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XN51_9PROT
Transcriptional regulator, MerR family protein {ECO:0000313|EMBL:EKM98094.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
transcriptional regulator, MerR family; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
SCNpilot_cont_750_bf_scaffold_1220_curated_9
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11586..11816
DNA (231bp) protein (77aa)
Mercuric ion transport protein, MerT n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QQR9_METTR
Mercuric ion transport protein, MerT {ECO:0000313|EMBL:EKM98238.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCNpilot_cont_750_bf_scaffold_1220_curated_10
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11832..11996
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362EAFB
Caudovirus prohead protease {ECO:0000313|EMBL:EFH13625.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCNpilot_cont_750_bf_scaffold_1220_curated_11
unknown

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comp(12067..12903)
DNA (837bp) protein (279aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1220_curated_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12973..13902
DNA (930bp) protein (310aa)
Membrane protein n=1 Tax=Asaia sp. SF2.1 RepID=V8A5P4_9PROT
Membrane protein {ECO:0000313|EMBL:EWY37644.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative transmembrane protein
Displaying 12 items

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