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SCNpilot_cont_750_bf_scaffold_29_curated

Search features with annotation key words

Displaying items 1-30 of 484 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_29_curated_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(433..1407)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000364466F
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDP62366.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
oligopeptide ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1400..2413)
DNA (1014bp) protein (338aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ94_9PROT
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:EDP62367.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2406..3284)
DNA (879bp) protein (293aa)
cytochrome C550 n=1 Tax=Elioraea tepidiphila RepID=UPI00037C5A98
ABC dipeptide transporter, inner membrane subunit DppC {ECO:0000313|EMBL:EDP62368.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_29_curated_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..4288)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003761BE6
D-Ala-D-Ala transporter subunit {ECO:0000313|EMBL:EDP62369.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter integral membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_29_curated_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4314..5891)
DNA (1578bp) protein (526aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ98_9PROT
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein {ECO:0000313|EMBL:EDP62370.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_6
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5922..6665)
DNA (744bp) protein (248aa)
short-chain dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQX5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM26367.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_750_bf_scaffold_29_curated_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6662..8650)
DNA (1989bp) protein (663aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:EDP62374.1}; EC=4.2.1.9 {ECO:0000313|EMBL:EDP62374.1};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036BC425
hyuB; hydantoin utilization protein B
SCNpilot_cont_750_bf_scaffold_29_curated_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8653..10692)
DNA (2040bp) protein (680aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000374EBFB
Hydantoinase {ECO:0000313|EMBL:ETW94010.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCNpilot_cont_750_bf_scaffold_29_curated_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10695..11513)
DNA (819bp) protein (273aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQX6_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EIM26368.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
IclR family transcripitonal regulator
SCNpilot_cont_750_bf_scaffold_29_curated_10
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11653..12453
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJR64487.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJR64487.1};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Enoyl-CoA hydratase / short chain enoyl-CoA hydratase n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C7C9_ALCDB
menB; enoyl-CoA hydratase / short chain enoyl-CoA hydratase
SCNpilot_cont_750_bf_scaffold_29_curated_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12595..13503)
DNA (909bp) protein (303aa)
Putative transcriptional regulatory protein, LysR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TPL4_9BRAD
Putative transcriptional regulatory protein, LysR family {ECO:0000313|EMBL:CCE08402.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_29_curated_12
Megavirus lba, Viruses

Not on your lists

13652..14137
DNA (486bp) protein (162aa)
Collagen-like protein 7 n=1 Tax=Megavirus courdo11 RepID=K7YVI9_9VIRU
Collagen-like protein 7 {ECO:0000313|EMBL:AGD92194.1}; TaxID=1235314 species="Viruses; dsDNA viruses, no RNA stage; Mimiviridae; unclassified Mimiviridae.;" source="Megavirus lba.;"
sclI; cell surface-anchored protein SclI
SCNpilot_cont_750_bf_scaffold_29_curated_13
unknown

Not on your lists

comp(14219..14563)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_29_curated_14
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14614..16779)
DNA (2166bp) protein (722aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYT4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33644.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_29_curated_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16810..17784)
DNA (975bp) protein (325aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM27_9RHIZ
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:EIM25019.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
esterase
SCNpilot_cont_750_bf_scaffold_29_curated_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17772..18866)
DNA (1095bp) protein (365aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM26_9RHIZ
anmK; anhydro-N-acetylmuramic acid kinase
SCNpilot_cont_750_bf_scaffold_29_curated_17
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18962..19747)
DNA (786bp) protein (262aa)
HxlR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQH0_9RHIZ
HxlR family transcriptional regulator {ECO:0000313|EMBL:KJS38346.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_29_curated_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19877..21292
DNA (1416bp) protein (472aa)
FAD linked oxidase domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAR4_ANADF
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ABS25810.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
SCNpilot_cont_750_bf_scaffold_29_curated_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21415..22920
DNA (1506bp) protein (502aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM25_9RHIZ
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EIM25017.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_20
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23027..23974
DNA (948bp) protein (316aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM24_9RHIZ
Glutathione ABC transporter permease {ECO:0000313|EMBL:KFG66869.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
dipeptide/oligopeptide/nickel ABC transporter permease
SCNpilot_cont_750_bf_scaffold_29_curated_21
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23992..24792
DNA (801bp) protein (267aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM23_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EIM25015.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_29_curated_22
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24912..25844)
DNA (933bp) protein (311aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP76_9PROT
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFH10896.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_750_bf_scaffold_29_curated_23
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25846..26733)
DNA (888bp) protein (296aa)
Inner-membrane translocator n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQG2_METS4
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ACA17648.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_29_curated_24
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26911..28134)
DNA (1224bp) protein (408aa)
Putative substrate-binding protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHH3_METS4
putative substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Putative substrate-binding protein {ECO:0000313|EMBL:ACA19399.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_750_bf_scaffold_29_curated_25
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28179..29402)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMH0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH11501.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29502..30194)
DNA (693bp) protein (231aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP73_9PROT
ABC transporter {ECO:0000313|EMBL:GAN78526.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30202..30954)
DNA (753bp) protein (251aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP72_9PROT
ABC transporter {ECO:0000313|EMBL:GAN78527.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_29_curated_28
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31111..31581
DNA (471bp) protein (157aa)
MaoC-like protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A363_9PROT
MaoC-like protein {ECO:0000313|EMBL:EHL99493.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
MaoC-like dehydratase
SCNpilot_cont_750_bf_scaffold_29_curated_29
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31578..32459
DNA (882bp) protein (294aa)
citrate (pro-3S)-lyase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A362_9PROT
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:EHL99492.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_750_bf_scaffold_29_curated_30
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32587..34053
DNA (1467bp) protein (489aa)
Type I secretion outer membrane protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSJ2_GRABC
type I secretion outer membrane protein
Type I secretion outer membrane protein {ECO:0000313|EMBL:AHJ63121.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Displaying items 1-30 of 484 in total

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