ggKbase home page

SCNpilot_cont_750_bf_scaffold_508_curated_13

Organism: scnpilot_dereplicated_Rhodospirillales_1

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(11317..11868)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 182.0
  • Bit_score: 223
  • Evalue 1.80e-55
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 182.0
  • Bit_score: 222
  • Evalue 9.10e-56
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F06DFA similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 183.0
  • Bit_score: 265
  • Evalue 3.90e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Granulibacter bethesdensis → Granulibacter → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCCATTCTGAAGATCGCCCGCATGGGCCACCCCGTGCTGCTGCAGCGCGCCGAACCGGTGGCCGACCCCACCGCGCCGGAGATCCGCCGCCTGGTCGCCGACATGATCGAGACCATGGAGGATGCCACGGGCGCCGGGCTGGCGGCGCCGCAGGTGCACGTGCCGCTGCGGCTGTTCGTGTTCCGGGTGAACCCCGACCGCGCCTCCGGCGACGCCGAGGACCGGGCGGTGCTGCCCAACGCGGTGGTGATCAACCCGACCGTGGAGCTGCTGGGCGAGGACCGCCGGCTGCGCTGGGAAGGCTGCCTGTCCATCCCCGGCCTGCGCGCCGCCGTGCCGCGCGCCTGGCGCATCCGCTACAGCGGCGTGGACACCACCGGCGCCCCCGTGGGCGGCGAGGTCACCGGCTTCCATGCCGGGGTGGTGCAGCACGAATACGACCATCTGGACGGCATATTGTACCCGATGCGCATGACCGATTTCAGCCAGTTCGGCTTCAACGAGGAGATCGCCCGCGCCCAGGCCCTGGCCCAGGCGGCCAAGCCGTGA
PROTEIN sequence
Length: 184
MAILKIARMGHPVLLQRAEPVADPTAPEIRRLVADMIETMEDATGAGLAAPQVHVPLRLFVFRVNPDRASGDAEDRAVLPNAVVINPTVELLGEDRRLRWEGCLSIPGLRAAVPRAWRIRYSGVDTTGAPVGGEVTGFHAGVVQHEYDHLDGILYPMRMTDFSQFGFNEEIARAQALAQAAKP*