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SCNpilot_cont_750_bf_scaffold_508_curated

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_508_curated_1
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

comp(183..944)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031B9969
hypothetical protein
Tax=RifOxyB12_full_OP3_50_7_curated
SCNpilot_cont_750_bf_scaffold_508_curated_2
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1328..2287
DNA (960bp) protein (320aa)
malonyl CoA-ACP transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YVI9_9PROT
Malonyl-CoA-(Acyl carrier protein) transacylase {ECO:0000313|EMBL:GAN77079.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCNpilot_cont_750_bf_scaffold_508_curated_3
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2299..3048
DNA (750bp) protein (250aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ABI63109.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABI63109.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPZ3_GRABC
SCNpilot_cont_750_bf_scaffold_508_curated_4
Gluconobacter thailandicus, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3251..3490
DNA (240bp) protein (80aa)
Acyl carrier protein n=3 Tax=Gluconobacter RepID=K7T0P7_GLUOY
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1291534 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter thailandicus NBRC 3255.;"
SCNpilot_cont_750_bf_scaffold_508_curated_5
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3624..4886
DNA (1263bp) protein (421aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
3-oxoacyl-ACP synthase n=1 Tax=Elioraea tepidiphila RepID=UPI000375092C
SCNpilot_cont_750_bf_scaffold_508_curated_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4919..5926
DNA (1008bp) protein (336aa)
YceG family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUQ6_9PROT
YceG family protein {ECO:0000313|EMBL:EHM03308.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein; K07082 UPF0755 protein
SCNpilot_cont_750_bf_scaffold_508_curated_7
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6119..6904)
DNA (786bp) protein (262aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFH13274.1}; EC=1.3.1.- {ECO:0000313|EMBL:EFH13274.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D4927
short-chain dehydrogenase
SCNpilot_cont_750_bf_scaffold_508_curated_8
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7004..7894
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000374EC37
Uncharacterized protein {ECO:0000313|EMBL:EGO96478.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_508_curated_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7904..8527
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; Guanylate kinase; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=KGUA_GRABC
SCNpilot_cont_750_bf_scaffold_508_curated_10
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8527..9450
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031EDE47
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EFH13228.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
auxin efflux carrier; K07088
SCNpilot_cont_750_bf_scaffold_508_curated_11
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9790..10695)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362CE81
transglutaminase-like protein
Transglutaminase-like protein {ECO:0000313|EMBL:ABI61382.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_508_curated_12
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10703..11320)
DNA (618bp) protein (206aa)
RpsU-divergently transcribed protein n=1 Tax=Acidiphilium sp. PM RepID=F7S254_9PROT
putative ubiquinone biosynthesis protein
RpsU-divergently transcribed protein {ECO:0000313|EMBL:KDM67442.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCNpilot_cont_750_bf_scaffold_508_curated_13
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11317..11868)
DNA (552bp) protein (184aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F06DFA
SCNpilot_cont_750_bf_scaffold_508_curated_14
Komagataeibacter rhaeticus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12093..12296
DNA (204bp) protein (68aa)
30S ribosomal protein S21 n=3 Tax=Gluconacetobacter RepID=RS21_GLUDA
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1432055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter rhaeticus AF1.;"
SCNpilot_cont_750_bf_scaffold_508_curated_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12385..12990)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00030FDF72
paiB; hypothetical protein; K07734 transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_508_curated_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13068..14510
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003717106
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase
Tax=GWC2_Rokubacteria_70_16_curated
SCNpilot_cont_750_bf_scaffold_508_curated_17
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14579..15277
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003625CF8
Uncharacterized protein {ECO:0000313|EMBL:GAN77909.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K07043
SCNpilot_cont_750_bf_scaffold_508_curated_18
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15318..16325
DNA (1008bp) protein (336aa)
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTH2_GRAMM
zinc-binding alcohol dehydrogenase family protein
Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AEU35204.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_750_bf_scaffold_508_curated_19
unknown

Not on your lists

comp(16457..17017)
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_508_curated_20
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17141..19726)
DNA (2586bp) protein (862aa)
Chaperone protein ClpB n=2 Tax=Acidiphilium RepID=F0J051_ACIMA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
clpB; chaperone protein ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
SCNpilot_cont_750_bf_scaffold_508_curated_21
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19919..20674
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E0F96
MOSC domain protein {ECO:0000313|EMBL:EFH12592.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
MOSC domain-containing protein; K07140
SCNpilot_cont_750_bf_scaffold_508_curated_22
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20813..21427)
DNA (615bp) protein (205aa)
Maf-like protein maf n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKI0_9PROT
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
septum formation inhibitor protein; K06287 septum formation protein
SCNpilot_cont_750_bf_scaffold_508_curated_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21424..22317)
DNA (894bp) protein (298aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.4.27 {ECO:0000256|HAMAP-Rule:MF_00921};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=PDRP_GRABC rbh
ATP/GTP-binding protein; K09773 hypothetical protein
SCNpilot_cont_750_bf_scaffold_508_curated_24
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22626..23648
DNA (1023bp) protein (341aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|SAAS:SAAS00078187}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|SAAS:SAAS00078176};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKI2_9PROT
SCNpilot_cont_750_bf_scaffold_508_curated_25
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23680..24753
DNA (1074bp) protein (358aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPC0_GRABC
SCNpilot_cont_750_bf_scaffold_508_curated_26
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24803..25501
DNA (699bp) protein (233aa)
Phosphatase/phosphohexomutase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPC1_GRABC
Hydrolase/phosphatase/phosphohexomutase {ECO:0000313|EMBL:GAN75969.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
phosphatase/phosphohexomutase family protein
SCNpilot_cont_750_bf_scaffold_508_curated_27
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25498..25950
DNA (453bp) protein (151aa)
Hypothetical membrane spanning protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPC2_GRABC
hypothetical protein; K08973 putative membrane protein
Hypothetical membrane spanning protein {ECO:0000313|EMBL:ABI63330.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCNpilot_cont_750_bf_scaffold_508_curated_28
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25950..26393
DNA (444bp) protein (148aa)
GCN5-like N-acetyltransferase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6R7_RHIFR
N-acetyltransferase GCN5
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AFL51573.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_750_bf_scaffold_508_curated_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26656..27930
DNA (1275bp) protein (425aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Transcription termination factor Rho n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BW45_GRABC
rho; transcription termination factor Rho; K03628 transcription termination factor Rho
SCNpilot_cont_750_bf_scaffold_508_curated_30
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28308..28574)
DNA (267bp) protein (89aa)
TonB n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKB8_9RHIZ
TonB {ECO:0000313|EMBL:CCV04573.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
energy transducer TonB; K03832 periplasmic protein TonB
Displaying items 1-30 of 41 in total

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