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scnpilot_p_inoc_scaffold_244_curated

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_244_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

544..1545
DNA (1002bp) protein (334aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreens
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7C8_NIAKG
scnpilot_p_inoc_scaffold_244_curated_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1558..2523
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360ED6D
Putative oxidoreductase {ECO:0000313|EMBL:GAO41075.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_244_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2543..3943
DNA (1401bp) protein (467aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNR2_NIAKG
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AEW00988.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_244_curated_4
unknown

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comp(4195..4413)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_5
unknown

Not on your lists

4432..4548
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_6
unknown

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comp(4563..6893)
DNA (2331bp) protein (777aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6904..7308)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BH13_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC94280.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
scnpilot_p_inoc_scaffold_244_curated_8
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7256..8413)
DNA (1158bp) protein (386aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB56708.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
scnpilot_p_inoc_scaffold_244_curated_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8504..8854
DNA (351bp) protein (117aa)
DNA-binding helix-turn-helix protein n=1 Tax=Enterococcus faecium LA4B-2 RepID=S4EXJ3_ENTFC
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EPI22379.1}; TaxID=1244150 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium LA4B-2.;"
Cro/CI family transcriptional regulator
scnpilot_p_inoc_scaffold_244_curated_10
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8995..11943)
DNA (2949bp) protein (983aa)
Putative hybrid glycoside hydrolase, group 92(-20) family protein id=4368714 bin=GWF2_Bacteroidetes_35_48 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
alpha-1,2-mannosidase
Tax=GWF2_Bacteroidetes_35_48_curated
scnpilot_p_inoc_scaffold_244_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12037..12474)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BEFFB
Single-stranded DNA-binding protein {ECO:0000256|RuleBase:RU000524}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
single-strand binding protein; K03111 single-strand DNA-binding protein
scnpilot_p_inoc_scaffold_244_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12550..13323)
DNA (774bp) protein (258aa)
Helix-turn-helix domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Z0_NIAKG
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEW01334.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_244_curated_13
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13452..14282)
DNA (831bp) protein (277aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KPX4_9FLAO
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:CDF80553.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
hypothetical protein
scnpilot_p_inoc_scaffold_244_curated_14
unknown

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comp(14478..16571)
DNA (2094bp) protein (698aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_15
unknown

Not on your lists

comp(16568..17572)
DNA (1005bp) protein (335aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_16
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(17577..19778)
DNA (2202bp) protein (734aa)
Hep Hag n=1 Tax=Escherichia fergusonii B253 RepID=E9ZC94_ESCFE
protein; outer membrane protein
Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
scnpilot_p_inoc_scaffold_244_curated_17
unknown

Not on your lists

comp(19775..20215)
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20226..21017)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDH2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57795.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_244_curated_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21019..21507)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDH1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57794.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_244_curated_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21507..22331)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDH0_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57793.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_244_curated_21
unknown

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comp(22332..22637)
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22603..22908)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDG8_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57791.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_244_curated_23
unknown

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comp(22908..23150)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_24
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23150..23632)
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC60031.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
scnpilot_p_inoc_scaffold_244_curated_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23634..24596)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDG5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57788.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_244_curated_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24623..25210)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDG4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57787.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_244_curated_27
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25207..26985)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CZ25_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHJ98930.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
scnpilot_p_inoc_scaffold_244_curated_28
unknown

Not on your lists

comp(26978..27163)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_244_curated_29
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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comp(27157..27459)
DNA (303bp) protein (101aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_244_curated_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27485..27916)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI0003655BB2
Uncharacterized protein {ECO:0000313|EMBL:EXY93057.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
Displaying items 1-30 of 124 in total

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