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scnpilot_p_inoc_scaffold_1179_curated

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1179_curated_1
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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96..470
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S1C7_9FLAO
Transcriptional regulator {ECO:0000313|EMBL:KGO86690.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_1179_curated_2
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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467..1066
DNA (600bp) protein (200aa)
Heavy metal transport/detoxification protein n=1 Tax=Galbibacter marinus RepID=K2PQQ2_9FLAO
Heavy metal transporter {ECO:0000313|EMBL:KGO86689.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
heavy metal transport/detoxification protein
scnpilot_p_inoc_scaffold_1179_curated_3
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1475..2062
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Prevotella oris C735 RepID=D7NG85_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CEA15401.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1179_curated_4
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

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2073..2885
DNA (813bp) protein (271aa)
Chromosome undetermined scaffold_654, whole genome shotgun sequence. (Fragment) n=1 Tax=Paramecium tetraurelia RepID=A0DVF9_PARTE
hypothetical protein
Chromosome undetermined scaffold_654, whole genome shotgun sequence {ECO:0000313|EMBL:CAK87026.1}; Flags: Fragment;; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Paramecium tetraurelia.;"
scnpilot_p_inoc_scaffold_1179_curated_5
Sulfurospirillum multivorans, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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2899..3870
DNA (972bp) protein (324aa)
Amidophosphoribosyltransferase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BV39_NITHN
Uncharacterized protein {ECO:0000313|EMBL:AHJ13271.1}; TaxID=1150621 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum multivorans DSM 12446.;"
amidophosphoribosyltransferase
scnpilot_p_inoc_scaffold_1179_curated_6
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3900..4901
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Acinetobacter calcoaceticus RepID=UPI000345ACF5
DNA protecting protein DprA {ECO:0000313|EMBL:CEA15403.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SMF family protein; K04096 DNA processing protein
scnpilot_p_inoc_scaffold_1179_curated_7
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5234..5620
DNA (387bp) protein (129aa)
hypothetical protein, partial n=1 Tax=Pedobacter agri RepID=UPI00029A5862
Uncharacterized protein {ECO:0000313|EMBL:EDM36057.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
scnpilot_p_inoc_scaffold_1179_curated_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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6186..7943
DNA (1758bp) protein (586aa)
n-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Putative uncharacterized protein id=2098034 bin=GWB2_Ignavibacteria_35_12 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_1179_curated_9
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7943..9235
DNA (1293bp) protein (431aa)
Restriction endonuclease S subunit {ECO:0000313|EMBL:AKH68802.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKH68802.1};; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Spongiibacter.;" source="Spongiibacter sp. IMCC21906.;"
restriction endonuclease S subunits-like protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
Restriction endonuclease S subunits-like protein n=1 Tax=Haemophilus haemolyticus M21639 RepID=F9H7B4_HAEHA
scnpilot_p_inoc_scaffold_1179_curated_10
Acaryochloris sp. HICR111A, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9237..10388
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Acaryochloris sp. HICR111A RepID=I6UBX8_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:AFM92597.1}; TaxID=576912 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris sp. HICR111A.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1179_curated_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10366..13353
DNA (2988bp) protein (996aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Restriction endonuclease, type I, EcoRI, R subunit/Type III id=2098044 bin=GWB2_Ignavibacteria_35_12 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_1179_curated_12
unknown

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comp(13693..13995)
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1179_curated_13
Acinetobacter sp. CIP-A165, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14119..15210
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP-A165 RepID=N8R9X2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU30907.1}; TaxID=40373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. CIP-A165.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1179_curated_14
unknown

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15602..16039
DNA (438bp) protein (146aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1179_curated_15
unknown

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16042..16686
DNA (645bp) protein (215aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1179_curated_16
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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16690..17607
DNA (918bp) protein (306aa)
WYL superfamily protein id=1794153 bin=GWD2_Bacteroidetes_40_43 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
WYL superfamily protein
Tax=GWE2_Bacteroidetes_40_63_curated
scnpilot_p_inoc_scaffold_1179_curated_17
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17930..18298
DNA (369bp) protein (123aa)
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2E6N4_9BACT
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:EPA00287.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
TonB family protein
scnpilot_p_inoc_scaffold_1179_curated_18
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18586..19179
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003792130
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV34362.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
scnpilot_p_inoc_scaffold_1179_curated_19
unknown

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19391..19852
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1179_curated_20
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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19855..20604
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Riemerella anatipestifer RepID=J9R9B3_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR36788.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
scnpilot_p_inoc_scaffold_1179_curated_21
Porphyromonas gingivicanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20838..21554
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A8D11
Uncharacterized protein {ECO:0000313|EMBL:KGN97714.1}; TaxID=266762 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivicanis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1179_curated_22
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21588..22412
DNA (825bp) protein (275aa)
Nin one binding (NOB1) Zn-ribbon like family protein n=1 Tax=Clostridium difficile CD170 RepID=T3FFB8_CLODI
VRR-NUC domain-containing protein {ECO:0000313|EMBL:EGD49550.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1179_curated_23
unknown

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22647..23333
DNA (687bp) protein (229aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1179_curated_24
unknown

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23596..24294
DNA (699bp) protein (233aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1179_curated_25
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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24494..25186
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GE48_LACS5
Uncharacterized protein {ECO:0000313|EMBL:KFC58768.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
Displaying 25 items

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