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scnpilot_p_inoc_scaffold_199_curated

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_199_curated_1
unknown

Not on your lists

2..1249
-----------------
DNA (1248bp)
protein (416aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_199_curated_2
unknown

Not on your lists

1257..1985
-----------------
DNA (729bp)
protein (243aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_199_curated_3
unknown

Not on your lists

2157..2636
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_199_curated_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3226..4509)
-----------------
DNA (1284bp)
protein (428aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:AEW02948.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEW02948.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA-directed DNA polymerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK10_NIAKG
DNA-directed DNA polymerase; K03502 DNA polymerase V
scnpilot_p_inoc_scaffold_199_curated_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4536..4967)
-----------------
DNA (432bp)
protein (144aa)
SOS response UmuD protein; K03503 DNA polymerase V [EC:3.4.21.-]
DNA repair protein n=1 Tax=Segetibacter koreensis RepID=UPI000363E3CA
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_199_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5057..5665
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK13_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02951.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_7
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5668..6051)
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BRT9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ02426.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
scnpilot_p_inoc_scaffold_199_curated_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6038..6820)
-----------------
DNA (783bp)
protein (261aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y0D6_9SPHI
Aminotransferase class I and II {ECO:0000313|EMBL:KIC90299.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_p_inoc_scaffold_199_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6947..8077
-----------------
DNA (1131bp)
protein (377aa)
radical SAM protein n=1 Tax=Niabella aurantiaca RepID=UPI0003769235
Radical SAM protein {ECO:0000313|EMBL:AHF15019.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
radical SAM protein
scnpilot_p_inoc_scaffold_199_curated_10
unknown

Not on your lists

comp(8126..8284)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_199_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8352..9794
-----------------
DNA (1443bp)
protein (481aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02903.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9791..10498
-----------------
DNA (708bp)
protein (236aa)
Nucleotidyl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ2_NIAKG
Nucleotidyltransferase {ECO:0000313|EMBL:GAL86277.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
nucleotidyltransferase
scnpilot_p_inoc_scaffold_199_curated_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10495..12870)
-----------------
DNA (2376bp)
protein (792aa)
TonB-dependent receptor n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFN9_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:CCH52714.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_199_curated_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12999..14324)
-----------------
DNA (1326bp)
protein (442aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP7_NIAKG
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_p_inoc_scaffold_199_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14413..15873)
-----------------
DNA (1461bp)
protein (487aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP6_NIAKG
outer membrane efflux protein; K12340 outer membrane channel protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW03067.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16005..17168)
-----------------
DNA (1164bp)
protein (388aa)
Cystathionine beta-lyase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYJ7_HALH1
Cystathionine beta-lyase {ECO:0000313|EMBL:KIC94585.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cystathionine beta-lyase
scnpilot_p_inoc_scaffold_199_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17168..18511)
-----------------
DNA (1344bp)
protein (448aa)
Serine/threonine exchange transporter, LAT family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMP4_NIAKG
serine/threonine exchange transporter, LAT family
Serine/threonine exchange transporter, LAT family {ECO:0000313|EMBL:AEW03065.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_18
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18653..18937
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SKI5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27116.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
scnpilot_p_inoc_scaffold_199_curated_19
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18953..20941)
-----------------
DNA (1989bp)
protein (663aa)
Fibronectin type III domain protein id=4653731 bin=GWA2_Ignavibacteria-rel_35_8 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
scnpilot_p_inoc_scaffold_199_curated_20
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(21055..26886)
-----------------
DNA (5832bp)
protein (1944aa)
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_199_curated_21
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26897..28660)
-----------------
DNA (1764bp)
protein (588aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RZB0_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16449.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
scnpilot_p_inoc_scaffold_199_curated_22
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28808..30106)
-----------------
DNA (1299bp)
protein (433aa)
OmpA/MotB domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGZ7_RUNSL
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEI47025.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_p_inoc_scaffold_199_curated_23
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30280..30912)
-----------------
DNA (633bp)
protein (211aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XHE9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMS33963.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
two component transcriptional regulator, LuxR family
scnpilot_p_inoc_scaffold_199_curated_24
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(30961..33981)
-----------------
DNA (3021bp)
protein (1007aa)
Uncharacterized protein id=4718909 bin=GWC2_Ignavibacteria_38_9 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
scnpilot_p_inoc_scaffold_199_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34435..35232
-----------------
DNA (798bp)
protein (266aa)
Electron transport protein SCO1/SenC n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG65_NIAKG
electron transport protein SCO1/SenC; K07152
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:AEW02704.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35243..35824
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG66_NIAKG
hypothetical protein; K08976 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02705.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35829..36209)
-----------------
DNA (381bp)
protein (127aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG69_NIAKG
methylated-DNA-(protein)-cysteine S-methyltransferase DNA binding protein; K07443 methylated-DNA-protein-cysteine methyltransferase related protein
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding protein {ECO:0000313|EMBL:AEW02708.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_p_inoc_scaffold_199_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36241..36987)
-----------------
DNA (747bp)
protein (249aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT25_9SPHI
scnpilot_p_inoc_scaffold_199_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37059..38129
-----------------
DNA (1071bp)
protein (357aa)
phosphoserine aminotransferase apoenzyme; K00831 phosphoserine aminotransferase [EC:2.6.1.52]
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FB96E
scnpilot_p_inoc_scaffold_199_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38241..39485
-----------------
DNA (1245bp)
protein (415aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036500A7
hypothetical protein
Uncharacterized conserved protein UCP033563 {ECO:0000313|EMBL:AEW02044.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 128 in total

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