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SCNpilot_expt_1000_bf_scaffold_185_curated

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_185_curated_1
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

542..2665
DNA (2124bp) protein (708aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036E3CB0
membrane-bound dehydrogenase domain-containing protein
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:ACU02582.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2711..3106
DNA (396bp) protein (132aa)
High-potential iron-sulfur protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMF1_9SPHI
High-potential iron-sulfur protein {ECO:0000256|RuleBase:RU000620}; Short=HiPIP {ECO:0000256|RuleBase:RU000620};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_185_curated_3
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3125..4480
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1N4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL61409.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
membrane-bound dehydrogenase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_185_curated_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4545..5702)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003754910
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase {ECO:0000313|EMBL:ACU02566.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_5
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5708..6877)
DNA (1170bp) protein (390aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L0L0_ZOBGA
SCNpilot_expt_1000_bf_scaffold_185_curated_6
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6882..8354)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DE55E
Putative sodium-coupled permease {ECO:0000313|EMBL:EPR65492.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
Na+/solute symporter
SCNpilot_expt_1000_bf_scaffold_185_curated_7
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8416..9759)
DNA (1344bp) protein (448aa)
Oxidoreductase domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3K3_SPHS2
Dehydrogenase {ECO:0000313|EMBL:AKD54920.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
oxidoreductase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_185_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9808..10860)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003705067
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADB42173.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11129..12151
DNA (1023bp) protein (341aa)
Luciferase-like, subgroup n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDT7_PEDSD
Putative monooxygenase {ECO:0000313|EMBL:GAO44538.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
luciferase
SCNpilot_expt_1000_bf_scaffold_185_curated_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12579..14165
DNA (1587bp) protein (529aa)
ABC transporter related protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RQJ6_LEAB4
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC58963.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
abc transporter related protein
SCNpilot_expt_1000_bf_scaffold_185_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14176..16329)
DNA (2154bp) protein (718aa)
peptidase S9 n=1 Tax=Niabella aurantiaca RepID=UPI00037201AA
Peptidase S9 {ECO:0000313|EMBL:AHF15346.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase S9B dipeptidylpeptidase IV domain-containing protein
SCNpilot_expt_1000_bf_scaffold_185_curated_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16521..17015)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KQM2_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06760.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17112..18053)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370765B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98891.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_14
unknown

Not on your lists

18057..18194
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_185_curated_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18263..19345)
DNA (1083bp) protein (361aa)
agmatine deiminase; K10536 agmatine deiminase [EC:3.5.3.12]
Agmatine deiminase {ECO:0000313|EMBL:AEW00640.1}; EC=3.5.3.12 {ECO:0000313|EMBL:AEW00640.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Agmatine deiminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH29_NIAKG
SCNpilot_expt_1000_bf_scaffold_185_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19378..20256)
DNA (879bp) protein (293aa)
N-carbamoylputrescine amidase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53]
N-carbamoylputrescine amidase {ECO:0000313|EMBL:AEW00641.1}; EC=3.5.1.53 {ECO:0000313|EMBL:AEW00641.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
N-carbamoylputrescine amidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH30_NIAKG
SCNpilot_expt_1000_bf_scaffold_185_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20374..22128)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003733BD1
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AEV97550.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22144..22527)
DNA (384bp) protein (128aa)
Transcriptional repressor, CopY family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ34_NIAKG
Putative transcriptional regulator {ECO:0000313|EMBL:GAO44364.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
CopY family transcriptional repressor; K07737 putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_185_curated_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22907..24643)
DNA (1737bp) protein (579aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003679A2F
Uncharacterized protein {ECO:0000313|EMBL:GAO45301.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_185_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25027..27225)
DNA (2199bp) protein (733aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
pyrophosphate-energized proton pump; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1]
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ38_NIAKG
SCNpilot_expt_1000_bf_scaffold_185_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27296..28807)
DNA (1512bp) protein (504aa)
YjeF-related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL0_NIAKG
hypothetical protein
YjeF-related protein {ECO:0000313|EMBL:AEV98172.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28939..29928)
DNA (990bp) protein (330aa)
Beta-lactamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFD9_NIAKG
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEV97349.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_185_curated_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30065..32713
DNA (2649bp) protein (883aa)
molecular chaperone ClpB n=1 Tax=Segetibacter koreensis RepID=UPI00035EE016
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
SCNpilot_expt_1000_bf_scaffold_185_curated_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33141..34037)
DNA (897bp) protein (299aa)
esterase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6117C
Putative esterase {ECO:0000313|EMBL:CCH51808.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
esterase
SCNpilot_expt_1000_bf_scaffold_185_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34050..35264)
DNA (1215bp) protein (405aa)
succinyl-CoA ligase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP4_NIAKG
SCNpilot_expt_1000_bf_scaffold_185_curated_26
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35582..36223
DNA (642bp) protein (214aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KML9_SOLCM
Cu/Zn superoxide dismutase
SCNpilot_expt_1000_bf_scaffold_185_curated_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

36427..37242
DNA (816bp) protein (272aa)
serine O-acetyltransferase; K00640 serine O-acetyltransferase [EC:2.3.1.30]
Transferase hexapeptide repeat containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEZ4_9SPHI
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:EHQ25247.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_185_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37246..38118
DNA (873bp) protein (291aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cysteine synthase B; K12339 cysteine synthase B [EC:2.5.1.47]
Cysteine synthase B n=1 Tax=Niabella soli DSM 19437 RepID=H1NLW1_9SPHI
SCNpilot_expt_1000_bf_scaffold_185_curated_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38435..39157
DNA (723bp) protein (241aa)
Probable transcriptional regulatory protein Niako_0294 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP86_NIAKG
Probable transcriptional regulatory protein OI18_18215 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_185_curated_30
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

39176..39829
DNA (654bp) protein (218aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1356852 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
carbonate dehydratase; K01673 carbonic anhydrase [EC:4.2.1.1]
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036630DC
Displaying items 1-30 of 96 in total

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