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SCNpilot_expt_1000_bf_scaffold_828_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_828_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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149..1477
DNA (1329bp) protein (443aa)
Putative D-glycerate permease n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THI7_NIAKG
putative D-glycerate permease
Putative D-glycerate permease {ECO:0000313|EMBL:AEW02833.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_828_curated_2
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1885..4494
DNA (2610bp) protein (870aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52]
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:ADB42543.1}; EC=3.2.1.52 {ECO:0000313|EMBL:ADB42543.1};; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
Beta-N-acetylhexosaminidase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QUR1_SPILD
SCNpilot_expt_1000_bf_scaffold_828_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4545..5711)
DNA (1167bp) protein (389aa)
Aminodeoxyfutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993}; Short=AFL synthase {ECO:0000256|HAMAP-Rule:MF_00993};; Short=Aminofutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993};; EC=2.5.1.120 {ECO:0000256|HAMAP-Rule:MF_00993};; Menaquinone biosynthetic enzyme MqnE {ECO:0000256|HAMAP-Rule:MF_00993}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Putative menaquinone biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH7_NIAKG
putative menaquinone biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_828_curated_4
unknown

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5758..5883
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_828_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5849..6676)
DNA (828bp) protein (276aa)
formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate deformylase {ECO:0000313|EMBL:AEV98957.1}; EC=3.5.1.10 {ECO:0000313|EMBL:AEV98957.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Formyltetrahydrofolate deformylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR43_NIAKG
SCNpilot_expt_1000_bf_scaffold_828_curated_6
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6849..8000)
DNA (1152bp) protein (384aa)
FG-GAP repeat protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1KXX3_9BACT
FG-GAP repeat protein {ECO:0000313|EMBL:EKB48985.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_828_curated_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8094..8558)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B77268
Uncharacterized protein {ECO:0000313|EMBL:ETZ24812.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_828_curated_8
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8758..9156
DNA (399bp) protein (133aa)
DoxX family protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SWS4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO43531.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
DoxX family protein; K15977 putative oxidoreductase
SCNpilot_expt_1000_bf_scaffold_828_curated_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9438..11915
DNA (2478bp) protein (826aa)
HRDC domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T239_PALPW
hrdc domain protein
HRDC domain protein {ECO:0000313|EMBL:ADQ78783.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
SCNpilot_expt_1000_bf_scaffold_828_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12088..13569
DNA (1482bp) protein (494aa)
Glycoside hydrolase family 28 n=1 Tax=Niabella soli DSM 19437 RepID=H1NT31_9SPHI
Glycoside hydrolase {ECO:0000313|EMBL:AHF16111.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glycoside hydrolase family protein
SCNpilot_expt_1000_bf_scaffold_828_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13589..14332
DNA (744bp) protein (248aa)
Endopygalactorunase n=1 Tax=Niabella soli DSM 19437 RepID=H1NT30_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16110.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glycoside hydrolase family protein
SCNpilot_expt_1000_bf_scaffold_828_curated_12
CG_Maritim_01, Maritimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14399..14719)
DNA (321bp) protein (107aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y357_9SPHI
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=CG_Maritim_01
SCNpilot_expt_1000_bf_scaffold_828_curated_13
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14940..16013
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037B4641
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEI49108.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_expt_1000_bf_scaffold_828_curated_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16010..16708
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB59_NIAKG
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEW02442.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_828_curated_15
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16925..17302
DNA (378bp) protein (126aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAW8_CHIPD
Chemotaxis protein CheY {ECO:0000313|EMBL:ETZ19683.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
LytTR family two component transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_828_curated_16
GWB1_OD1_37_5, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17311..17664)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI000372D7BD
Uncharacterized protein {ECO:0000313|EMBL:KKQ34172.1}; TaxID=1618742 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_37_5.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_828_curated_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17651..18691)
DNA (1041bp) protein (347aa)
Kelch repeat protein (3 repeats) n=1 Tax=Tannerella sp. CAG:118 RepID=R5IRK0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAO44145.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_828_curated_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19155..20519
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAW4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59336.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_828_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20525..21802
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNS2_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00998.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_828_curated_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22794..28187
DNA (5394bp) protein (1798aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QG46_SPILD
Uncharacterized protein {ECO:0000313|EMBL:KIC95837.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
Displaying 20 items

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