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SCNpilot_expt_1000_bf_scaffold_457_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_457_curated_1
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..473
DNA (471bp) protein (157aa)
DNA-binding protein n=1 Tax=Pedobacter agri RepID=UPI00029A37C7
DNA-binding protein {ECO:0000313|EMBL:KFF04311.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_1000_bf_scaffold_457_curated_2
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

606..1274
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000379AB14
Uncharacterized protein {ECO:0000313|EMBL:KIF31968.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
methylase
SCNpilot_expt_1000_bf_scaffold_457_curated_3
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(1407..2018)
DNA (612bp) protein (204aa)
Filamentation induced by cAMP protein Fic id=4091616 bin=GWF2_Bacteroidetes_43_63 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
filamentation induced by camp protein fic; K04095 cell filamentation protein
Tax=GWF2_Bacteroidetes_43_63_curated
SCNpilot_expt_1000_bf_scaffold_457_curated_4
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(1999..2220)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP52828.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
Putative uncharacterized protein id=1825719 bin=GWE2_Bacteroidetes_42_42 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_curated_5
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2687..3517)
DNA (831bp) protein (277aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter sp. BAL39 RepID=A6E7M9_9SPHI
Short-chain dehydrogenase {ECO:0000313|EMBL:KFF23284.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_457_curated_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3634..4353)
DNA (720bp) protein (240aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5N7_9FLAO
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFK35290.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_457_curated_7
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4370..4864)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGX7_9FLAO
Membrane protein {ECO:0000313|EMBL:KEQ29025.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
transmembrane protein
SCNpilot_expt_1000_bf_scaffold_457_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4892..5308)
DNA (417bp) protein (139aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAF3_NIAKG
OsmC subfamily peroxiredoxin; K04063 osmotically inducible protein OsmC
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:AEV98115.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_457_curated_9
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5395..6243)
DNA (849bp) protein (283aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KE49_9FLAO
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJL71443.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_1000_bf_scaffold_457_curated_10
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6487..7410)
DNA (924bp) protein (308aa)
Leucine rich repeat protein n=1 Tax=Leptospira noguchii str. 2001034031 RepID=M6Y0A4_9LEPT
Leucine rich repeat protein {ECO:0000313|EMBL:EMO87120.1}; TaxID=1193053 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii str. 2001034031.;"
lipoprotein
SCNpilot_expt_1000_bf_scaffold_457_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7850..9412)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000367C7A6
Uncharacterized protein {ECO:0000313|EMBL:AHF17587.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
propeptide PepSY amd peptidase M4
SCNpilot_expt_1000_bf_scaffold_457_curated_12
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9434..9841)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CBY3_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81556.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_457_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9854..12385)
DNA (2532bp) protein (844aa)
TonB-denpendent receptor n=1 Tax=Niabella aurantiaca RepID=UPI00036BE08E
TonB-denpendent receptor {ECO:0000313|EMBL:AHF15461.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tonb-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
SCNpilot_expt_1000_bf_scaffold_457_curated_14
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13038..16124)
DNA (3087bp) protein (1029aa)
Putative transmembrane protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XKG5_9BACT
Membrane-bound dehydrogenase domain-containing protein {ECO:0000313|EMBL:AHM63031.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
membrane-bound dehydrogenase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_457_curated_15
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16460..16648)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZRR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGJ72008.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
membrane protein
SCNpilot_expt_1000_bf_scaffold_457_curated_16
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16641..17255)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LK00_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB57070.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_curated_17
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17294..17500)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FRV9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI94324.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_curated_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17576..18025)
DNA (450bp) protein (150aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXJ4_SOLCM
putative redox protein, regulator of disulfide bond formation
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AFD05290.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_457_curated_19
unknown

Not on your lists

comp(18333..18635)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_457_curated_20
unknown

Not on your lists

18838..19221
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_457_curated_21
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19231..21873)
DNA (2643bp) protein (881aa)
Aminotransferase, class III n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0R894_9DELT
Aminotransferase, class III {ECO:0000313|EMBL:EQC43151.1}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_curated_22
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(21848..23077)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003738C9F
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SCNpilot_expt_1000_bf_scaffold_457_curated_23
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

comp(23074..24600)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7I9_9FLAO
radical sam domain-containing protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
SCNpilot_expt_1000_bf_scaffold_457_curated_24
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24602..25936)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003723B01
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:ADU32117.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141; / JCM 9156 / N-4).;"
SCNpilot_expt_1000_bf_scaffold_457_curated_25
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25951..27285)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S8C3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO95651.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
radical sam domain-containing protein
SCNpilot_expt_1000_bf_scaffold_457_curated_26
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

27467..28576
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQ82_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO43387.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_457_curated_27
unknown

Not on your lists

comp(28582..29148)
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_457_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29163..30227)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPX4_NIAKG
hypothetical protein; K09151 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_457_curated_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30648..33218)
DNA (2571bp) protein (857aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AC83D
TonB-dependent receptor {ECO:0000313|EMBL:KIC89744.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor
SCNpilot_expt_1000_bf_scaffold_457_curated_30
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33315..34025)
DNA (711bp) protein (237aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAR0_CHIPD
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC89745.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
LytTR family two component transcriptional regulator
Displaying items 1-30 of 46 in total

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