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SCNpilot_expt_1000_bf_scaffold_561_curated

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_561_curated_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(235..1479)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C4417
Zinc carboxypeptidase family protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_2
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1838..2671
DNA (834bp) protein (278aa)
LmbE family protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X723_CELAD
lmbe family protein
LmbE family protein {ECO:0000313|EMBL:ADV47472.1}; Flags: Precursor;; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_3
unknown

Not on your lists

2760..3083
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_561_curated_4
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2958..3521)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S515_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY50932.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_5
unknown

Not on your lists

3611..3757
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_561_curated_6
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4016..5137)
DNA (1122bp) protein (374aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTJ0_PEDHD
glycosyl hydrolase family protein
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:ACU05768.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_7
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5374..6246)
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W740_DYAFD
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM61141.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_561_curated_8
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6485..9580
DNA (3096bp) protein (1032aa)
SusC/RagA family TonB-linked outer membrane protein id=4319083 bin=GWF2_Bacteroidetes_42_66 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein rbh
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9600..11240
DNA (1641bp) protein (547aa)
RagB/SusD domain protein id=4030875 bin=GWA2_Bacteroidetes_42_15 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
RagB/SusD domain-containing protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_10
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11402..14242
DNA (2841bp) protein (947aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000369EE15
Tax=RBG_13_Planctomycetes_62_9_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_11
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

14273..15772
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CDD1A
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15885..16742
DNA (858bp) protein (286aa)
amidohydrolase n=1 Tax=Streptomyces vitaminophilus RepID=UPI00036662FF
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66102.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
TIM-barrel fold metal-dependent hydrolase
SCNpilot_expt_1000_bf_scaffold_561_curated_13
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16760..17734
DNA (975bp) protein (325aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DSC5_9BACL
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EED06940.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius LAA1.;"
alcohol dehydrogenase GroES domain-containing protein
SCNpilot_expt_1000_bf_scaffold_561_curated_14
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18173..19324
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003662FD6
Uncharacterized protein {ECO:0000313|EMBL:EOS73849.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
mandelate racemase/muconate lactonizing protein
SCNpilot_expt_1000_bf_scaffold_561_curated_15
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

19334..20119
DNA (786bp) protein (262aa)
Zn-dependent hydrolases of the beta-lactamase fold id=4383589 bin=GWF2_Planctomycete_41_51 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
beta-lactamase domain-containing protein
Tax=GWF2_Planctomycetes_41_51_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_16
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20148..20831
DNA (684bp) protein (228aa)
Demethylmenaquinone methyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQX7_SINAD
Demethylmenaquinone methyltransferase
Tax=RBG_16_Planctomycetes_64_12_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_17
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

20847..21554
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037E392B
LmbE family protein
Tax=CG_Elusi_05
SCNpilot_expt_1000_bf_scaffold_561_curated_18
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

21551..22339
DNA (789bp) protein (263aa)
Putative uncharacterized protein id=3406679 bin=GWF2_Planctomycetes_42_9 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_19
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

22433..24037
DNA (1605bp) protein (535aa)
SSS sodium solute transporter superfamily id=4000326 bin=GWF2_Planctomycetes_42_9 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Sodium/glucose cotransporter (Na(+)/glucose symporter)
Tax=GWF2_Planctomycetes_42_9_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24292..25182)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000368B0B1
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV99856.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25294..28629
DNA (3336bp) protein (1112aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D6B7
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACU61057.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_22
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28757..31912
DNA (3156bp) protein (1052aa)
TonB-dependent Transducer n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L2E0_ZOBGA
TonB-dependent transducer
TonB-dependent Transducer {ECO:0000313|EMBL:CAZ98072.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_23
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31931..33607
DNA (1677bp) protein (559aa)
SusD/RagB family lipoprotein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8A4_ZOBGA
SusD/RagB family lipoprotein
SusD/RagB family lipoprotein {ECO:0000313|EMBL:CAZ98073.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_24
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33693..35663
DNA (1971bp) protein (657aa)
Alpha-glucosidase id=3857896 bin=GWF2_Bacteroidetes_42_66 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
alpha-glucosidase
Tax=RBG_13_Bacteroidetes_42_15_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_25
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35870..36955
DNA (1086bp) protein (362aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A1V3_9PORP
SCNpilot_expt_1000_bf_scaffold_561_curated_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

37088..38449
DNA (1362bp) protein (454aa)
Sugar transporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUQ7_CHIPD
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ACU61055.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_561_curated_27
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38655..39785
DNA (1131bp) protein (377aa)
nanH; sialidase (EC:3.2.1.18)
Sialidase, family GH33 id=4403785 bin=GWF2_Bacteroidetes_41_9 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_expt_1000_bf_scaffold_561_curated_28
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(39920..41116)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX29_9DELT
ATPase AAA
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_expt_1000_bf_scaffold_561_curated_29
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41150..41608)
DNA (459bp) protein (153aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HipA domain protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FW53_9FLAO
HipA domain protein {ECO:0000313|EMBL:EIA07282.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
SCNpilot_expt_1000_bf_scaffold_561_curated_30
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41646..42113)
DNA (468bp) protein (156aa)
hypothetical protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
HIPA protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VX42_9FLAO
HIPA protein {ECO:0000313|EMBL:EPR74671.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
Displaying items 1-30 of 86 in total

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