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SCNpilot_expt_1000_bf_scaffold_4337_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4337_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..1333
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F348C
Uncharacterized protein {ECO:0000313|EMBL:AHF16772.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4337_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1462..2406)
DNA (945bp) protein (315aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabell
5-(carboxyamino)imidazole ribonucleotide synthase; K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
phosphoribosylaminoimidazole carboxylase n=1 Tax=Niabella aurantiaca RepID=UPI0003739CB7
SCNpilot_expt_1000_bf_scaffold_4337_curated_3
unknown

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2731..2994
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4337_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3072..4010
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037B8333
Uncharacterized protein {ECO:0000313|EMBL:AHF14774.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_expt_1000_bf_scaffold_4337_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4022..5284)
DNA (1263bp) protein (421aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLS8_9SPHI
SCNpilot_expt_1000_bf_scaffold_4337_curated_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5949..6353
DNA (405bp) protein (135aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855, ECO:0000256|SAAS:SAAS00181223};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
D-fructose 1,6-bisphosphatase; K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11]
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGK5_NIAKG
SCNpilot_expt_1000_bf_scaffold_4337_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6441..7202
DNA (762bp) protein (254aa)
ABC transporter ATP-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI0003663658
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF14772.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphonate-transporting ATPase; K09687 antibiotic transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_4337_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7318..7752
DNA (435bp) protein (145aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
putative Outer membrane protein MIP; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
peptidylprolyl isomerase n=1 Tax=Niabella aurantiaca RepID=UPI00037FF0E3
SCNpilot_expt_1000_bf_scaffold_4337_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7833..8396
DNA (564bp) protein (188aa)
DNA repair protein MutT n=1 Tax=Niabella aurantiaca RepID=UPI0003802247
DNA repair protein MutT {ECO:0000313|EMBL:AHF14768.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NUDIX hydrolase
SCNpilot_expt_1000_bf_scaffold_4337_curated_10
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

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8425..8820
DNA (396bp) protein (132aa)
S23 ribosomal protein id=4808413 bin=GWC2_OP3-like_45_7 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
S23 ribosomal protein
Tax=GWA2_WOR_2_45_18_curated
SCNpilot_expt_1000_bf_scaffold_4337_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8765..9448
DNA (684bp) protein (228aa)
DNA-3-methyladenine glycosylase II; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000380D1E0
Iron-sulfur cluster assembly protein HesB {ECO:0000313|EMBL:AHF14383.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_4337_curated_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9530..12013
DNA (2484bp) protein (828aa)
beta-galactosidase; K01190 beta-galactosidase [EC:3.2.1.23]
Beta-galactosidase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISB1_9BACE
Beta-galactosidase {ECO:0000313|EMBL:EFI08838.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
SCNpilot_expt_1000_bf_scaffold_4337_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12085..12654)
DNA (570bp) protein (190aa)
Uncharacterized protein id=3928555 bin=GWC2_Bacteroidetes_46_850 species=Imtechella halotolerans genus=Imtechella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying 13 items

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