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SCNpilot_expt_1000_bf_scaffold_1919_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1919_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..469
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000360E3C5
Uncharacterized protein {ECO:0000313|EMBL:AHF17760.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
colicin V production protein; K03558 membrane protein required for colicin V production
SCNpilot_expt_1000_bf_scaffold_1919_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

564..2771
DNA (2208bp) protein (736aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003800B47
Uncharacterized protein {ECO:0000313|EMBL:AHF17922.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1919_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2786..3871)
DNA (1086bp) protein (362aa)
Acyl-CoA dehydrogenase type 2 domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQE0_9SPHI
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHF16394.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
pigment production hydroxylase
SCNpilot_expt_1000_bf_scaffold_1919_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3861..4481)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037FE3FD
Membrane protein {ECO:0000313|EMBL:AHF16393.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
nicotinamide mononucleotide transporter PnuC; K03811 nicotinamide mononucleotide transporter
SCNpilot_expt_1000_bf_scaffold_1919_curated_5
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

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comp(4748..5008)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FVN7_9SPHI
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
SCNpilot_expt_1000_bf_scaffold_1919_curated_6
Bacillus indicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5088..5729)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI000375EAFC
Uncharacterized protein {ECO:0000313|EMBL:KEZ50886.1}; TaxID=1458122 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus indicus LMG 22858.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_1919_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5892..6635
DNA (744bp) protein (248aa)
multidrug ABC transporter ATPase n=1 Tax=Niabella aurantiaca RepID=UPI00037F8A29
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:AHF16412.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1919_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6751..6978
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQG0_9SPHI
Gas vesicle protein {ECO:0000313|EMBL:AHF16411.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1919_curated_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7130..8344)
DNA (1215bp) protein (405aa)
Zinc carboxypeptidase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VI27_9SPHI
Zinc carboxypeptidase {ECO:0000313|EMBL:KIC89434.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
peptidase M14 carboxypeptidase A
SCNpilot_expt_1000_bf_scaffold_1919_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9749..10435)
DNA (687bp) protein (229aa)
membrane protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D4D7D
Membrane protein {ECO:0000313|EMBL:AHF16330.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptidase membrane zinc metallopeptidase; K06973
SCNpilot_expt_1000_bf_scaffold_1919_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10956..12221
DNA (1266bp) protein (422aa)
DNA repair protein radA n=1 Tax=Niabella soli DSM 19437 RepID=H1NV91_9SPHI
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms
Displaying 11 items

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