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SCNpilot_expt_1000_bf_scaffold_17454_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_17454_curated_1
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..317)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6D4_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07972.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_expt_1000_bf_scaffold_17454_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(367..1920)
DNA (1554bp) protein (518aa)
RagB/SusD domain-containing protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUJ8_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF16245.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SusD family protein
SCNpilot_expt_1000_bf_scaffold_17454_curated_3
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1942..2277)
DNA (336bp) protein (112aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KVK6_9BACE
hypothetical protein
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EES67159.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
SCNpilot_expt_1000_bf_scaffold_17454_curated_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2310..5303)
DNA (2994bp) protein (998aa)
TonB-dependent receptor plug n=1 Tax=Niabella soli DSM 19437 RepID=H1NUJ9_9SPHI
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO42773.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_17454_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5377..6465)
DNA (1089bp) protein (363aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niabella soli DSM 19437 RepID=H1NUK0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17875.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anti-FecI sigma factor FecR
SCNpilot_expt_1000_bf_scaffold_17454_curated_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6523..7200)
DNA (678bp) protein (226aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NUK1_9SPHI
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW01540.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 6 items

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