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SCNpilot_expt_1000_bf_scaffold_8283_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8283_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..749
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369BA59
Penicillin-binding protein {ECO:0000313|EMBL:AHF15216.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PASTA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8283_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

811..1122
DNA (312bp) protein (104aa)
NADH oxidase n=1 Tax=Niabella aurantiaca RepID=UPI00035CED4A
NADH oxidase {ECO:0000313|EMBL:AHF15215.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
rhodanese domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8283_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1160..1450)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000380BD0B
Uncharacterized protein {ECO:0000313|EMBL:AHF14848.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8283_curated_4
unknown

Not on your lists

2972..3202
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3427..4230)
DNA (804bp) protein (268aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Niabella soli DSM 19437 RepID=H1NLC7_9SPHI
SCNpilot_expt_1000_bf_scaffold_8283_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4227..5225)
DNA (999bp) protein (333aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Niabella soli DSM 19437 RepID=H1NLC7_9SPHI
SCNpilot_expt_1000_bf_scaffold_8283_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5561..6952)
DNA (1392bp) protein (464aa)
magnesium transporter n=1 Tax=Niabella aurantiaca RepID=UPI00036A411B
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
magnesium transporter; K06213 magnesium transporter
SCNpilot_expt_1000_bf_scaffold_8283_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7104..7487
DNA (384bp) protein (128aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC7_NIAKG
nuclear protein SET; K07117
Nuclear protein SET {ECO:0000313|EMBL:AEV96733.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_8283_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7500..8069)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E2678
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AHF14687.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_8283_curated_10
unknown

Not on your lists

8995..9084
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9165..9857
DNA (693bp) protein (231aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381C019
SCNpilot_expt_1000_bf_scaffold_8283_curated_12
unknown

Not on your lists

9859..10362
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10415..10834)
DNA (420bp) protein (140aa)
peptide-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI0003658155
Peptide-binding protein {ECO:0000313|EMBL:AHF14852.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SH3 type 3 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_8283_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10853..11332)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036340ED
Transporter {ECO:0000313|EMBL:AHF14851.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
transport-associated
SCNpilot_expt_1000_bf_scaffold_8283_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11575..13596)
DNA (2022bp) protein (674aa)
ABC transporter related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLC2_9SPHI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF14850.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
SCNpilot_expt_1000_bf_scaffold_8283_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13673..14299
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F8CC5
Uncharacterized protein {ECO:0000313|EMBL:AHF17363.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_8283_curated_17
unknown

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14554..15459
DNA (906bp) protein (302aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_curated_18
unknown

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15555..15914
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_curated_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16469..16903
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003808B11
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96369.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_8283_curated_20
unknown

Not on your lists

16878..17138
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8283_curated_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17420..18325
DNA (906bp) protein (302aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase {ECO:0000313|EMBL:KGO80781.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
DNA primase
SCNpilot_expt_1000_bf_scaffold_8283_curated_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18771..19148
DNA (378bp) protein (126aa)
Mobilization protein BmgB n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH6_9SPHI
Mobilization protein {ECO:0000313|EMBL:AHF14822.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8283_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19145..19414
DNA (270bp) protein (90aa)
Relaxase/mobilization nuclease family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NLH5_9SPHI
Relaxase {ECO:0000313|EMBL:AHF14823.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Relaxase/mobilization nuclease family protein
Displaying 23 items

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