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SCNpilot_expt_1000_bf_scaffold_3926_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3926_curated_1
unknown

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24..209
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3926_curated_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(206..1783)
DNA (1578bp) protein (526aa)
histidine kinase (EC:2.7.11.1)
Multi-sensor signal transduction histidine kinase n=1 Tax=Imtechella halotolerans K1 RepID=I0WEA0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ETZ20961.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCNpilot_expt_1000_bf_scaffold_3926_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1949..3175)
DNA (1227bp) protein (409aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJA0_9SPHI
Alpha-2-macroglobulin {ECO:0000313|EMBL:AHF14131.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alpha-2-macroglobulin domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3926_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4320..8135)
DNA (3816bp) protein (1272aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJA0_9SPHI
Alpha-2-macroglobulin {ECO:0000313|EMBL:AHF14131.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alpha-2-macroglobulin domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3926_curated_5
unknown

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8166..8342
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3926_curated_6
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8443..10716)
DNA (2274bp) protein (758aa)
Copper-resistance protein, CopA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0K1_9FLAO
P-ATPase superfamily P-type ATPase copper transporter {ECO:0000313|EMBL:CDT31776.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
multicopper oxidase type 3
SCNpilot_expt_1000_bf_scaffold_3926_curated_7
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10727..11614)
DNA (888bp) protein (296aa)
Copper-exporting ATPase {ECO:0000313|EMBL:EFK35877.1}; EC=3.6.3.4 {ECO:0000313|EMBL:EFK35877.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
heavy metal translocating p-type atpase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-exporting ATPase n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNS5_9SPHI
SCNpilot_expt_1000_bf_scaffold_3926_curated_8
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12884..13318)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0ME25_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA85962.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3926_curated_9
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13338..13712)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF25691.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
SCNpilot_expt_1000_bf_scaffold_3926_curated_10
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13742..13963)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C2X0_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP87142.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
SCNpilot_expt_1000_bf_scaffold_3926_curated_11
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14065..14580)
DNA (516bp) protein (172aa)
DSBA-like thioredoxin domain protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EEH6_9FLAO
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:EGV43224.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
DSBA oxidoreductase
SCNpilot_expt_1000_bf_scaffold_3926_curated_12
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14906..15070)
DNA (165bp) protein (55aa)
Cadmium, cobalt and zinc/H(+)-K(+) antiporter n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FY75_9SPHI
Cadmium, cobalt and zinc/H(+)-K(+) antiporter {ECO:0000313|EMBL:EEI92128.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
czcD; Cadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD; K03295 cation efflux system protein, CDF family
Displaying 12 items

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